RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 ZP4Q12836 540 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 FOXF1Q12946 379 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 MLLT11Q13015 90 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-210ENST00000561817 MRPL28Q13084 256 aaKnown RBP5.88□□□□□ -1.47
CAPN3-210ENST00000561817 SGCBQ16585 318 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 TSTQ16762 297 aaKnown RBP5.88□□□□□ -1.47
CAPN3-210ENST00000561817 SOWAHCQ53LP3 525 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-210ENST00000561817 OR2G6Q5TZ20 316 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 C1orf140Q5VVS0 124 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 VASNQ6EMK4 673 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 OPN5Q6U736 354 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 C5orf46Q6UWT4 87 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 RPS19BP1Q86WX3 136 aaKnown RBP5.88□□□□□ -1.47
CAPN3-210ENST00000561817 DTX1Q86Y01 620 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 PHC2Q8IXK0 858 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 DND1Q8IYX4 353 aaKnown RBP5.88□□□□□ -1.47
CAPN3-210ENST00000561817 IL22RA1Q8N6P7 574 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 NLGN4YQ8NFZ3 816 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-210ENST00000561817 OR52E2Q8NGJ4 325 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 OR4K13Q8NH42 304 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 OR52N1Q8NH53 320 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 ZNF519Q8TB69 540 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 NDNFQ8TB73 568 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 TBC1D15Q8TC07 691 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 ADAMTS14Q8WXS8 1223 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 TMEM234Q8WY98 164 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 RASD2Q96D21 266 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 C1GALT1C1Q96EU7 318 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 TRMT61AQ96FX7 289 aaKnown RBP5.88□□□□□ -1.47
CAPN3-210ENST00000561817 PLEKHA8Q96JA3 519 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 MRGPRX4Q96LA9 322 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 Q96M85 177 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 TSPAN32Q96QS1 320 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 DCUN1D5Q9BTE7 237 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 KATNB1Q9BVA0 655 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 GPR87Q9BY21 358 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 POTEKPQ9BYX7 375 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 OR11A1Q9GZK7 315 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 OR51E2Q9H255 320 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 CDCP1Q9H5V8 836 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 FANCFQ9NPI8 374 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 NANSQ9NR45 359 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 ERVK13-1Q9NX77 482 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 P4HTMQ9NXG6 502 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 MRPL39Q9NYK5 338 aaKnown RBP5.88□□□□□ -1.47
CAPN3-210ENST00000561817 FBXL2Q9UKC9 423 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 PCDHB10Q9UN67 800 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 ERGIC3Q9Y282 383 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 KCNMB2Q9Y691 235 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 ALPK2Q86TB3 2170 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 SPTBN2O15020 2390 aa5.88□□□□□ -1.47
CAPN3-210ENST00000561817 TEX13CA0A0J9YWL9 993 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 KRTAP9-6A0A140TA67 174 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 PGPEP1LA6NFU8 196 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 LIPT2A6NK58 231 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 SLC22A31A6NKX4 558 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 CDRT15L2A8MXV6 281 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 MS4A18H0YCH9 400 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 BLOC1S5-TXNDC5H3BN57 136 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 CCRL2O00421 344 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 TP53I11O14683 189 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 AIREO43918 545 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 TRIM3O75382 744 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-210ENST00000561817 TNFSF15O95150 251 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 NUDT14O95848 222 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 IFNGP01579 166 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 TFP02787 698 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 GYPBP06028 91 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 SBK2P0C263 348 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 ICAM2P13598 275 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 SPI1P17947 270 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 GRPRP30550 384 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 SDHAP31040 664 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 DLSTP36957 453 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 SSR4P51571 173 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 P2RY4P51582 365 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 MAP2K6P52564 334 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 WNT4P56705 351 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 CTXN1P60606 82 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 RPS15P62841 145 aaKnown RBP5.87□□□□□ -1.47
CAPN3-210ENST00000561817 MED22Q15528 200 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 ZNF239Q16600 458 aaKnown RBP5.87□□□□□ -1.47
CAPN3-210ENST00000561817 MS4A18Q3C1V0 323 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 KRTCAP3Q53RY4 240 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 ALG10Q5BKT4 473 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 MESTQ5EB52 335 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 EMC4Q5J8M3 183 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 FAM69AQ5T7M9 428 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 B3GNTL1Q67FW5 361 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-210ENST00000561817 CD200R1LQ6Q8B3 271 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 ZNF322Q6U7Q0 402 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-210ENST00000561817 IL20RBQ6UXL0 311 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 MAMDC2Q7Z304 686 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-210ENST00000561817 NANOGNBQ7Z5D8 188 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 LHFPL3Q86UP9 236 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 WDFY1Q8IWB7 410 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 PSD4Q8NDX1 1056 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 SDR9C7Q8NEX9 313 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 OR51G2Q8NGK0 314 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 OR9Q1Q8NGQ5 310 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms