RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 LOC110117498-PIK3R3F6TDL0 507 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 FAAHO00519 579 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 EIF1AYO14602 144 aaKnown RBP6.12□□□□□ -1.43
SPG11-224ENST00000561268 TNFSF11O14788 317 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 GPR37O15354 613 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 ZNF264O43296 627 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 CXCL13O43927 109 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 FZD7O75084 574 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 GCM2O75603 506 aaPredicted RBP6.12□□□□□ -1.43
SPG11-224ENST00000561268 UPK1BO75841 260 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 INMTO95050 263 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 LGI1O95970 557 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 ADAP00813 363 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 THBDP07204 575 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 UBL4AP11441 157 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 POU2F1P14859 743 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 PAX1P15863 534 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 PPP3CBP16298 524 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 GABRB1P18505 474 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 RHCEP18577 417 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 COX5AP20674 150 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 UQCRC2P22695 453 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 DNASE1P24855 282 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 SOX6P35712 828 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 LIMS1P48059 325 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 MVDP53602 400 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 PCBP3P57721 371 aaKnown RBP6.12□□□□□ -1.43
SPG11-224ENST00000561268 SMIM11AP58511 58 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 DEFA1P59665 94 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 DEFA3P59666 94 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 CDC42P60953 191 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 SNRPGP62308 76 aaKnown RBP6.12□□□□□ -1.43
SPG11-224ENST00000561268 RPS26P62854 115 aaKnown RBP6.12□□□□□ -1.43
SPG11-224ENST00000561268 ADAM8P78325 824 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 ITGADQ13349 1161 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 TOMM34Q15785 309 aaPredicted RBP6.12□□□□□ -1.43
SPG11-224ENST00000561268 IFI44LQ53G44 452 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 TMEM201Q5SNT2 666 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 PDZK1Q5T2W1 519 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 TYW3Q6IPR3 259 aaKnown RBP6.12□□□□□ -1.43
SPG11-224ENST00000561268 CD300LDQ6UXZ3 194 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 TFAP2EQ6VUC0 442 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 STAC2Q6ZMT1 411 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 SLC46A3Q7Z3Q1 461 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 TMEM179BQ7Z7N9 219 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 ADCK1Q86TW2 530 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 GABRG1Q8N1C3 465 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 LRRC75A-AS1Q8N1F1 130 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 ATG16L2Q8NAA4 619 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 OR4C15Q8NGM1 316 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 OR5W2Q8NH69 310 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 PHOSPHO1Q8TCT1 267 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 ZHX1-C8orf76Q96EF9 292 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 HSH2DQ96JZ2 352 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 DHRS1Q96LJ7 313 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 WFIKKN1Q96NZ8 548 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 TMEM204Q9BSN7 226 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 COPS4Q9BT78 406 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 DGCR6LQ9BY27 220 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 SRXN1Q9BYN0 137 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 SETD2Q9BYW2 2564 aaPredicted RBP6.12□□□□□ -1.43
SPG11-224ENST00000561268 LAT2Q9GZY6 243 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 SLC38A1Q9H2H9 487 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 ZNF556Q9HAH1 456 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 ISYNA1Q9NPH2 558 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 EXOSC3Q9NQT5 275 aaKnown RBP6.12□□□□□ -1.43
SPG11-224ENST00000561268 BEX4Q9NWD9 120 aaPredicted RBP6.12□□□□□ -1.43
SPG11-224ENST00000561268 SELENONQ9NZV5 590 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 PDP1Q9P0J1 537 aaPredicted RBP6.12□□□□□ -1.43
SPG11-224ENST00000561268 KLHL13Q9P2N7 655 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 CRNNQ9UBG3 495 aaPredicted RBP6.12□□□□□ -1.43
SPG11-224ENST00000561268 NDRG3Q9UGV2 375 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 DAPK2Q9UIK4 370 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 MCTS1Q9ULC4 181 aaKnown RBP6.12□□□□□ -1.43
SPG11-224ENST00000561268 EMC9Q9Y3B6 208 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 CORINQ9Y5Q5 1042 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 SNX8Q9Y5X2 465 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 LYVE1Q9Y5Y7 322 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 IGKV3D-15A0A087WSY6 115 aa6.11□□□□□ -1.43
SPG11-224ENST00000561268 SERINC4A6NH21 518 aa6.11□□□□□ -1.43
SPG11-224ENST00000561268 AGAP5A6NIR3 686 aa6.11□□□□□ -1.43
SPG11-224ENST00000561268 METTL15A6NJ78 407 aa6.11□□□□□ -1.43
SPG11-224ENST00000561268 EFCAB9A8MZ26 197 aa6.11□□□□□ -1.43
SPG11-224ENST00000561268 C16orf97H3BN30 126 aa6.11□□□□□ -1.43
SPG11-224ENST00000561268 HMGN4O00479 90 aa6.11□□□□□ -1.43
SPG11-224ENST00000561268 SMAD9O15198 467 aaKnown RBP6.11□□□□□ -1.43
SPG11-224ENST00000561268 DNPH1O43598 174 aa6.11□□□□□ -1.43
SPG11-224ENST00000561268 AIREO43918 545 aa6.11□□□□□ -1.43
SPG11-224ENST00000561268 FAM20BO75063 409 aa6.11□□□□□ -1.43
SPG11-224ENST00000561268 TMCC2O75069 709 aa6.11□□□□□ -1.43
SPG11-224ENST00000561268 ADAM11O75078 769 aa6.11□□□□□ -1.43
SPG11-224ENST00000561268 STX11O75558 287 aa6.11□□□□□ -1.43
SPG11-224ENST00000561268 AGR2O95994 175 aa6.11□□□□□ -1.43
SPG11-224ENST00000561268 C1QCP02747 245 aa6.11□□□□□ -1.43
SPG11-224ENST00000561268 MT-ND2P03891 347 aa6.11□□□□□ -1.43
SPG11-224ENST00000561268 THBS1P07996 1170 aa6.11□□□□□ -1.43
SPG11-224ENST00000561268 FOSL1P15407 271 aa6.11□□□□□ -1.43
SPG11-224ENST00000561268 HPGDP15428 266 aa6.11□□□□□ -1.43
SPG11-224ENST00000561268 CD36P16671 472 aa6.11□□□□□ -1.43
SPG11-224ENST00000561268 KLK2P20151 261 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms