RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 UPK3AO75631 287 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 CCNB2O95067 398 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 NDUFB2O95178 105 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 BCL10O95999 233 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 F13BP05160 661 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 ITGA5P08648 1049 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 EPXP11678 715 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 COX6B1P14854 86 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 ZNF26P17031 533 aaPredicted RBP8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 DNAJA1P31689 397 aaKnown RBP8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 KIR2DL3P43628 341 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 GPR4P46093 362 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 DAP3P51398 398 aaKnown RBP8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 FXYD6P3P58550 94 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 FAPQ12884 760 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 OR7E24Q6IFN5 339 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 PGBD2Q6P3X8 592 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 CD300LDQ6UXZ3 194 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 ZNF627Q7L945 461 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 LINGO2Q7L985 606 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 HDDC2Q7Z4H3 204 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 C10orf67Q8IYJ2 551 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 OR13C2Q8NGS9 318 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 OR51A7Q8NH64 312 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 MOSPD2Q8NHP6 518 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 ASB10Q8WXI3 467 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 KISS1RQ969F8 398 aaPredicted RBP8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 TMEM54Q969K7 222 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 NRBF2Q96F24 287 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 RSRC1Q96IZ7 334 aaKnown RBP8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 WFIKKN1Q96NZ8 548 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 RAB3IPQ96QF0 476 aaPredicted RBP8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 DGCR6LQ9BY27 220 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 NTN4Q9HB63 628 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 NRIP3Q9NQ35 241 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 IL20Q9NYY1 176 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 UPB1Q9UBR1 384 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 MGAT4BQ9UQ53 548 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 AP4S1Q9Y587 144 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 RTTNQ86VV8 2226 aa8.48□□□□□ -1.05
RABGGTA-221ENST00000561055 CENPEQ02224 2701 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 SH3D21A4FU49 640 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 UNC119BA6NIH7 251 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 ZNF726A6NNF4 738 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 ZNF587BE7ETH6 402 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 ARPC3O15145 178 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 AHCYL1O43865 530 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 GASTP01350 101 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 IGHV3-9P01782 118 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 CD14P08571 375 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 PGA4P0DJD7 388 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 PGA3P0DJD8 388 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 APEHP13798 732 aaKnown RBP8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 HOXB1P14653 301 aaPredicted RBP8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 ACADSP16219 412 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 PAX7P23759 505 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 FOXG1P55316 489 aaPredicted RBP8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 SH3BGRP55822 239 aaPredicted RBP8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 BIDP55957 195 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 CTXN1P60606 82 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 RPL27P61353 136 aaKnown RBP8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 IL1RL1Q01638 556 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 TGFBR3Q03167 851 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 COX10Q12887 443 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 GABRA6Q16445 453 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 ACKR1Q16570 336 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 TIMM23BQ5SRD1 257 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 PHYHD1Q5SRE7 291 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 FAM205BPQ63HN1 556 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 RPL13AP3Q6NVV1 102 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 SMARCD3Q6STE5 483 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 DPY19L2P2Q6ZN68 376 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 C22orf34Q6ZV56 151 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 BHLHA15Q7RTS1 189 aaPredicted RBP8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 FAM122BQ7Z309 247 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 TMEM179BQ7Z7N9 219 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 MEX3DQ86XN8 651 aaKnown RBP8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 WDFY1Q8IWB7 410 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 ZNF295-AS1Q8N0V1 137 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 UBE2J2Q8N2K1 259 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 GPR137CQ8N3F9 429 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 C17orf78Q8N4C9 275 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 CLDN22Q8N7P3 220 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 ZNF519Q8TB69 540 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 FNDC8Q8TC99 324 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 MAGEE2Q8TD90 523 aaPredicted RBP8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 GIPC3Q8TF64 312 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 HSD17B8Q92506 261 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 ZNF566Q969W8 418 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 KCNK17Q96T54 332 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 EMC6Q9BV81 110 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 NDEL1Q9GZM8 345 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 GPR35Q9HC97 309 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 CRIM1Q9NZV1 1036 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 ZNF346Q9UL40 294 aaKnown RBP8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 U3KQV3 271 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 DSCAMO60469 2012 aa8.47□□□□□ -1.05
RABGGTA-221ENST00000561055 A6NIZ1 184 aa8.46□□□□□ -1.06
RABGGTA-221ENST00000561055 OR5H1A6NKK0 313 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms