RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 MAOBP27338 520 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 CST6Q15828 149 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 ZNF511Q8NB15 262 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 DUSP18Q8NEJ0 188 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 SLC38A3Q99624 504 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 TRAF4Q9BUZ4 470 aaPredicted RBP6.56□□□□□ -1.36
USP3-210ENST00000559192 SGPP1Q9BX95 441 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 CNTNAP3Q9BZ76 1288 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 CYSLTR2Q9NS75 346 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 CLDND1Q9NY35 253 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 NCDNQ9UBB6 729 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 TESQ9UGI8 421 aaKnown RBP6.56□□□□□ -1.36
USP3-210ENST00000559192 D6RAR5 112 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 DFFBO76075 338 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 KNG1P01042 644 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 TAS2R19P59542 299 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 CXADRP78310 365 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 TNFRSF17Q02223 184 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 PDZK1IP1Q13113 114 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 RPE65Q16518 533 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 DUSP5Q16690 384 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 GSG1Q2KHT4 349 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 SFRP5Q5T4F7 317 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 MFSD12Q6NUT3 480 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 TMEM88Q6PEY1 159 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 RNF113BQ8IZP6 322 aaKnown RBP6.56□□□□□ -1.36
USP3-210ENST00000559192 SLC39A11Q8N1S5 342 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 RAB7BQ96AH8 199 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 BORCS7Q96B45 105 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 FOXRED1Q96CU9 486 aaPredicted RBP6.56□□□□□ -1.36
USP3-210ENST00000559192 ALG12Q9BV10 488 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 PTDSS2Q9BVG9 487 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 MS4A7Q9GZW8 240 aaPredicted RBP6.56□□□□□ -1.36
USP3-210ENST00000559192 TMEM231Q9H6L2 316 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 ACKR4Q9NPB9 350 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 SERTAD4Q9NUC0 356 aa6.56□□□□□ -1.36
USP3-210ENST00000559192 A0A0D9SG52 128 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 ANKUB1A6NFN9 424 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 GABARAPH6UMI1 98 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 ABLIM3O94929 683 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 ZNF28P17035 718 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 HMGA2P52926 109 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 DEFB103AP81534 67 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 C19orf57Q0VDD7 668 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 ERV3-1Q14264 604 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 HMGN3Q15651 99 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 LINC00303Q3SY05 128 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 OTPQ5XKR4 325 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 NHLRC1Q6VVB1 395 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 TRAPPC6BQ86SZ2 158 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 SLC51BQ86UW2 128 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 UEVLDQ8IX04 471 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 FAM58AQ8N1B3 248 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 AMER3Q8N944 861 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 MFSD9Q8NBP5 474 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 TMEM106AQ96A25 262 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 RNF170Q96K19 258 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 PITHD1Q9GZP4 211 aaPredicted RBP6.55□□□□□ -1.36
USP3-210ENST00000559192 PURGQ9UJV8 347 aaKnown RBP6.55□□□□□ -1.36
USP3-210ENST00000559192 ACAD8Q9UKU7 415 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 ZNF337Q9Y3M9 751 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 A0A1B0GWA3 101 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 TNFSF12O43508 249 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 HIST1H1CP16403 213 aaKnown RBP6.55□□□□□ -1.36
USP3-210ENST00000559192 FGF9P31371 208 aaPredicted RBP6.55□□□□□ -1.36
USP3-210ENST00000559192 ZNF84P51523 738 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 CAV2P51636 162 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 NOGQ13253 232 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 SLC9A3R2Q15599 337 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 Q499Y3 187 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 TRMT12Q53H54 448 aaKnown RBP6.55□□□□□ -1.36
USP3-210ENST00000559192 OVCH1Q7RTY7 1134 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 PLPP7Q8NBV4 271 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 OR5M1Q8NGP8 315 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 INTS14Q96SY0 518 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 ELF4Q99607 663 aaPredicted RBP6.55□□□□□ -1.36
USP3-210ENST00000559192 OR11A1Q9GZK7 315 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 MEPEQ9NQ76 525 aaPredicted RBP6.55□□□□□ -1.36
USP3-210ENST00000559192 PRSS16Q9NQE7 514 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 LTBP1Q14766 1721 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 C17orf113A0A1B0GUU1 675 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 TNFP01375 233 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 FABP1P07148 127 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 F3P13726 295 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 Q3ZCU0 254 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 Q5BKY6 102 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 OR7E24Q6IFN5 339 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 STEAP1BQ6NZ63 245 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 ABHD17CQ6PCB6 329 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 OR10Z1Q8NGY1 313 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 ZNF596Q8TC21 504 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 JSRP1Q96MG2 331 aaPredicted RBP6.55□□□□□ -1.36
USP3-210ENST00000559192 ABHD1Q96SE0 405 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 ST6GALNAC5Q9BVH7 336 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 ADAM19Q9H013 955 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 TSPAN10Q9H1Z9 355 aaPredicted RBP6.55□□□□□ -1.36
USP3-210ENST00000559192 ANKRD19PQ9H560 264 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 FN3KRPQ9HA64 309 aa6.55□□□□□ -1.36
USP3-210ENST00000559192 ELOVL3Q9HB03 270 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms