RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 RFT1Q96AA3 541 aa10.21□□□□□ -0.78
CLPX-204ENST00000559152 NECAB3Q96P71 396 aaPredicted RBP10.21□□□□□ -0.78
CLPX-204ENST00000559152 KLHDC3Q9BQ90 382 aa10.21□□□□□ -0.78
CLPX-204ENST00000559152 CRB3Q9BUF7 120 aa10.21□□□□□ -0.78
CLPX-204ENST00000559152 HDHD2Q9H0R4 259 aa10.21□□□□□ -0.78
CLPX-204ENST00000559152 VSX1Q9NZR4 365 aaPredicted RBP10.21□□□□□ -0.78
CLPX-204ENST00000559152 ZNF221Q9UK13 617 aa10.21□□□□□ -0.78
CLPX-204ENST00000559152 SPATA2Q9UM82 520 aa10.21□□□□□ -0.78
CLPX-204ENST00000559152 HEATR5AQ86XA9 2040 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 TTC28Q96AY4 2481 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 A0A0G2JMP0 313 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 A0A0X1KG70 313 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 HMX3A6NHT5 357 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 A6NIZ1 184 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 C11orf98E9PRG8 122 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 PLPP3O14495 311 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 ZNF208O43345 1280 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 TIAF1O95411 115 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 CFIP05156 583 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 EIF4EP06730 217 aaKnown RBP10.2□□□□□ -0.78
CLPX-204ENST00000559152 FGF5P12034 268 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 TDGF1P13385 188 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 ALOX5APP20292 161 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 CRABP1P29762 137 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 GRPRP30550 384 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 FBXW4P57775 412 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 RAP1BP61224 184 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 RAP1AP62834 184 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 RASGEF1BQ0VAM2 473 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 TRA2AQ13595 282 aaKnown RBP eCLIP10.2□□□□□ -0.78
CLPX-204ENST00000559152 CARTPTQ16568 116 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 ACKR1Q16570 336 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 SLC25A35Q3KQZ1 300 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 RSBN1Q5VWQ0 802 aaPredicted RBP10.2□□□□□ -0.78
CLPX-204ENST00000559152 C1QL3Q5VWW1 255 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 LIPNQ5VXI9 398 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 ZNF57Q68EA5 555 aaPredicted RBP10.2□□□□□ -0.78
CLPX-204ENST00000559152 TMEM205Q6UW68 189 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 OR4M2Q8NGB6 313 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 OR6N2Q8NGY6 317 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 MFSD8Q8NHS3 518 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 ZNF519Q8TB69 540 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 IFI44Q8TCB0 444 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 SLC22A8Q8TCC7 542 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 ADAMTS14Q8WXS8 1223 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 DDIT4LQ96D03 193 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 GFM1Q96RP9 751 aaKnown RBP10.2□□□□□ -0.78
CLPX-204ENST00000559152 THAP7Q9BT49 309 aaPredicted RBP10.2□□□□□ -0.78
CLPX-204ENST00000559152 WACQ9BTA9 647 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 COMMD4Q9H0A8 199 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 WDR54Q9H977 334 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 B3GAT2Q9NPZ5 323 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 MRM2Q9UI43 246 aaKnown RBP10.2□□□□□ -0.78
CLPX-204ENST00000559152 IKZF2Q9UKS7 526 aa10.2□□□□□ -0.78
CLPX-204ENST00000559152 ADAMTS20P59510 1910 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 TMEM212A6NML5 194 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 TFECO14948 347 aaPredicted RBP10.19□□□□□ -0.78
CLPX-204ENST00000559152 UPK3AO75631 287 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 ZFPL1O95159 310 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 UBL3O95164 117 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 CER1O95813 267 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 RAF1P04049 648 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 CCKBRP32239 447 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 KIR2DL3P43628 341 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 ZP4Q12836 540 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 Q499Y3 187 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 CEP78Q5JTW2 689 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 PHF19Q5T6S3 580 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 LYPD4Q6UWN0 246 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 PM20D2Q8IYS1 436 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 OTOSQ8NHW6 89 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 ZNF671Q8TAW3 534 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 RNF138Q8WVD3 245 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 MMP28Q9H239 520 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 NOX4Q9NPH5 578 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 BRD7Q9NPI1 651 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 B9D1Q9UPM9 204 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 A0A1W2PPK0 400 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 NPIPB13A6NJU9 1138 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 CENPXA8MT69 81 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 NPIPB4C9JG80 1138 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 H7C1C5 153 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 MEN1O00255 615 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 DCTN6O00399 190 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 OR8G3PP0DMU2 310 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 ATF1P18846 271 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 HLA-DMAP28067 261 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 DDOSTP39656 456 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 DAP3P51398 398 aaKnown RBP10.19□□□□□ -0.78
CLPX-204ENST00000559152 NANOS3P60323 173 aaKnown RBP10.19□□□□□ -0.78
CLPX-204ENST00000559152 LCN6P62502 163 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 FAM205BPQ63HN1 556 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 BICRALQ6AI39 1079 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 DNM1P34Q6PK57 102 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 THEM6Q8WUY1 208 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 NXPE2Q96DL1 559 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 DERL3Q96Q80 235 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 SPSB2Q99619 263 aa10.19□□□□□ -0.78
CLPX-204ENST00000559152 WDR77Q9BQA1 342 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms