RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 RPL36A-HNRNPH2H7BZ11 118 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 EEF1E1O43324 174 aaKnown RBP12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 SMNDC1O75940 238 aaKnown RBP eCLIP12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 IFNGR1P15260 489 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 PPP3CBP16298 524 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 CDH2P19022 906 aaPredicted RBP12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 PSMB1P20618 241 aaKnown RBP12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 SDHAP31040 664 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 IST1P53990 364 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 CTXN1P60606 82 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 ESRRGP62508 458 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 ELF3P78545 371 aaPredicted RBP12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 SRSF1Q07955 248 aaKnown RBP eCLIP12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 LAPTM4AQ15012 233 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 ACKR1Q16570 336 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 HMBOX1Q6NT76 420 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 NIPAL3Q6P499 406 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 NCCRP1Q6ZVX7 275 aaPredicted RBP12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 NUFIP2Q7Z417 695 aaKnown RBP12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 TMEM179BQ7Z7N9 219 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 AMIGO2Q86SJ2 522 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 LIX1LQ8IVB5 337 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 TMEM123Q8N131 208 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 KDM8Q8N371 416 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 C1orf162Q8NEQ5 155 aaPredicted RBP12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 ASB10Q8WXI3 467 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 ZNF566Q969W8 418 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 BOD1Q96IK1 185 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 OR2M2Q96R28 347 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 GPA33Q99795 319 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 PKP2Q99959 881 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 POLDIP3Q9BY77 421 aaKnown RBP12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 SMURF2Q9HAU4 748 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 ASB6Q9NWX5 421 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 GRHPRQ9UBQ7 328 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 UPB1Q9UBR1 384 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 USP9YO00507 2555 aaPredicted RBP12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 PKDREJQ9NTG1 2253 aa12.49□□□□□ -0.41
SUPT16H-208ENST00000557652 GCN1Q92616 2671 aaKnown RBP12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 SLC35F4A4IF30 521 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 ZNF587BE7ETH6 402 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 XKRYO14609 159 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 F13BP05160 661 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 OSMP13725 252 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 COX5AP20674 150 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 CD79BP40259 229 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 BIDP55957 195 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 PPP1R8Q12972 351 aaKnown RBP12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 ITGADQ13349 1161 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 ARMC4Q5T2S8 1044 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 KDM4DQ6B0I6 523 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 OR7E24Q6IFN5 339 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 FAM122BQ7Z309 247 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 P2RY8Q86VZ1 359 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 C20orf196Q8IYI0 205 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 GABRG1Q8N1C3 465 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 GPR137CQ8N3F9 429 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 ARIH2OSQ8N7S6 290 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 MOSPD2Q8NHP6 518 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 TEX47Q8TBZ9 253 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 KATNB1Q9BVA0 655 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 RBM24Q9BX46 236 aaKnown RBP12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 MRPL13Q9BYD1 178 aaKnown RBP12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 C12orf49Q9H741 205 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 MOV10Q9HCE1 1003 aaKnown RBP12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 PAPOLBQ9NRJ5 636 aaKnown RBP12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 TAS2R16Q9NYV7 291 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 USE1Q9NZ43 259 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 OAZ3Q9UMX2 235 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 GPR52Q9Y2T5 361 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 ORC6Q9Y5N6 252 aa12.48□□□□□ -0.41
SUPT16H-208ENST00000557652 RELNP78509 3460 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 PTPN13Q12923 2485 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 KRT33AO76009 404 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 HLA-DOBP13765 273 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 HOXB1P14653 301 aaPredicted RBP12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 POU2F1P14859 743 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 ACADSP16219 412 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 MPGP29372 298 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 CSNK1A1P48729 337 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 SELENOPP49908 381 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 ZNF133P52736 654 aaPredicted RBP12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 FXYD6P3P58550 94 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 PPP2R2BQ00005 443 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 TFF3Q07654 80 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 RIPK1Q13546 671 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 HIST3H3Q16695 136 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 NRN1LQ496H8 165 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 THEM4Q5T1C6 240 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 ZNF474Q6S9Z5 364 aaPredicted RBP12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 KLHL17Q6TDP4 642 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 CCDC36Q8IYA8 594 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 LNX2Q8N448 690 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 C17orf78Q8N4C9 275 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 ZNF610Q8N9Z0 462 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 ICA1LQ8NDH6 482 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 STEAP2Q8NFT2 490 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 OR2T33Q8NG76 320 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 ZNF519Q8TB69 540 aa12.47□□□□□ -0.41
SUPT16H-208ENST00000557652 GTPBP3Q969Y2 492 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms