RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 LIPCP11150 499 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 POU3F3P20264 500 aaPredicted RBP13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 RBM34P42696 430 aaKnown RBP13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 PPICP45877 212 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 ZNF74Q16587 644 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 OR51A4Q8NGJ6 313 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 OR52I2Q8NH67 350 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 ZNF417Q8TAU3 575 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 STT3BQ8TCJ2 826 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 ZNF587Q96SQ5 575 aaPredicted RBP13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 CYSLTR2Q9NS75 346 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 SUSD2Q9UGT4 822 aa13.95□□□□□ -0.18
TMEM55B-207ENST00000557041 TCRBP04435 133 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 RRAS2P62070 204 aaPredicted RBP13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 GALK2Q01415 458 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 SPOCK1Q08629 439 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 ACKR1Q16570 336 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 ZNF440Q8IYI8 595 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 OR6V1Q8N148 313 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 FCAMRQ8WWV6 532 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 MICU1Q9BPX6 476 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 ATG5Q9H1Y0 275 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 MMP25Q9NPA2 562 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 POLE3Q9NRF9 147 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 NTMQ9P121 344 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 CHRNA9Q9UGM1 479 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 TMED7-TICAM2A0A0A6YYA0 188 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 UCHL1P09936 223 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 CXCL12P48061 93 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 NANOS3P60323 173 aaKnown RBP13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 SCGB2B2Q4G0G5 96 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 OR2T35Q8NGX2 323 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 TNFAIP8L1Q8WVP5 186 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 KLHL15Q96M94 604 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 VN1R1Q9GZP7 353 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 CLEC4MQ9H2X3 399 aaPredicted RBP13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 CKLFQ9UBR5 152 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 TMED7Q9Y3B3 224 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 A0A0A6YYJ9 748 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 A0A1W2PPL8 197 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 TRABD2BA6NFA1 517 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 H0YC42 278 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 MBTPS2O43462 519 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 AKR7A3O95154 331 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 CD2P06729 351 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 VEGFCP49767 419 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 EIF2B1Q14232 305 aaKnown RBP13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 OR10K2Q6IF99 312 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 ZNF782Q6ZMW2 699 aaPredicted RBP13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 GIMAP1Q8WWP7 306 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 DVL3Q92997 716 aaPredicted RBP13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 CRB3Q9BUF7 120 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 RTN4RQ9BZR6 473 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 KLHDC2Q9Y2U9 406 aa13.94□□□□□ -0.18
TMEM55B-207ENST00000557041 COL4A3Q01955 1670 aa13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 TRBV11-1A0A0K0K1C0 115 aa13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 H0YIG0 161 aa13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 GIMD1P0DJR0 217 aa13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 ABCD3P28288 659 aa13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 GUCA1AP43080 201 aaPredicted RBP13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 AFF3P51826 1226 aaKnown RBP13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 SLC37A1P57057 533 aa13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 TLE3Q04726 772 aa13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 RNLSQ5VYX0 342 aa13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 MRGPREQ86SM8 312 aa13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 TPRA1Q86W33 373 aa13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 PELOQ9BRX2 385 aaKnown RBP13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 OR51J1Q9H342 316 aa13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 A0A0B4J293 547 aa13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 FAM25EA8MYX2 175 aa13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 SLC2A1P11166 492 aa13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 NPR2P20594 1047 aa13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 SDHAP31040 664 aa13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 ART1P52961 327 aa13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 UBE2MP61081 183 aaKnown RBP13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 CCDC74AQ96AQ1 378 aa13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 RNF170Q96K19 258 aa13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 COA3Q9Y2R0 106 aaPredicted RBP13.93□□□□□ -0.18
TMEM55B-207ENST00000557041 TICRRQ7Z2Z1 1910 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 IGHV1OR21-1A0A087WYE8 117 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 PIAS2O75928 621 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 RPS4Y1P22090 263 aaKnown RBP13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 DMKNQ6E0U4 476 aaPredicted RBP13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 TMEM225Q6GV28 225 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 CD200R1LQ6Q8B3 271 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 DPCDQ9BVM2 203 aaPredicted RBP13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 CGGBP1Q9UFW8 167 aaPredicted RBP13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 CACNA1HO95180 2353 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 KRT33AO76009 404 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 GTF2F2P13984 249 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 RBMS1P29558 406 aaKnown RBP13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 FASLGP48023 281 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 EMP2P54851 167 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 FMODQ06828 376 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 FAPQ12884 760 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 ALKBH1Q13686 389 aaKnown RBP13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 ELAVL1Q15717 326 aaKnown RBP13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 ZNF141Q15928 474 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 COL28A1Q2UY09 1125 aa13.92□□□□□ -0.18
TMEM55B-207ENST00000557041 PCGF3Q3KNV8 242 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms