RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 HIF3AQ9Y2N7 669 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 APCP25054 2843 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 ARPC4-TTLL3A0A0A6YYG9 625 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 A0A1W2PR80 420 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 ZNF99A8MXY4 864 aaPredicted RBP9.36□□□□□ -0.91
LINC00239-201ENST00000556973 CENPBD1B2RD01 187 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 CLOCKO15516 846 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 ATP5HO75947 161 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 PDE5AO76074 875 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 DIRAS1O95057 198 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 PLAUP00749 431 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 RAF1P04049 648 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 RASSF2P50749 326 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 DAP3P51398 398 aaKnown RBP9.36□□□□□ -0.91
LINC00239-201ENST00000556973 IST1P53990 364 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 UBE2NP61088 152 aaKnown RBP9.36□□□□□ -0.91
LINC00239-201ENST00000556973 RPS4XP62701 263 aaKnown RBP9.36□□□□□ -0.91
LINC00239-201ENST00000556973 ARF1P84077 181 aaKnown RBP9.36□□□□□ -0.91
LINC00239-201ENST00000556973 MS4A2Q01362 244 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 BSPH1Q075Z2 132 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 BNIP1Q12981 228 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 KEAP1Q14145 624 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 TAF11Q15544 211 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 CEACAM16Q2WEN9 425 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 ZBED5Q49AG3 693 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 HIKESHIQ53FT3 197 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 ALG10Q5BKT4 473 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 FGD3Q5JSP0 725 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 ADAM5Q6NVV9 412 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 KLHL24Q6TFL4 600 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 TMEM108Q6UXF1 575 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 PAMR1Q6UXH9 720 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 ZNF704Q6ZNC4 412 aaPredicted RBP9.36□□□□□ -0.91
LINC00239-201ENST00000556973 PIWIL3Q7Z3Z3 882 aaKnown RBP9.36□□□□□ -0.91
LINC00239-201ENST00000556973 HDDC2Q7Z4H3 204 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 ZDHHC21Q8IVQ6 265 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 CCDC36Q8IYA8 594 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 MOSPD2Q8NHP6 518 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 TMEM54Q969K7 222 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 SLC7A6OSQ96CW6 309 aaPredicted RBP9.36□□□□□ -0.91
LINC00239-201ENST00000556973 MBD6Q96DN6 1003 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 ZNF837Q96EG3 531 aaPredicted RBP9.36□□□□□ -0.91
LINC00239-201ENST00000556973 LRGUKQ96M69 825 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 TNFRSF13CQ96RJ3 184 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 SEPHS2Q99611 448 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 ULBP2Q9BZM5 246 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 MAGIXQ9H6Y5 334 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 MOV10Q9HCE1 1003 aaKnown RBP9.36□□□□□ -0.91
LINC00239-201ENST00000556973 GLTPQ9NZD2 209 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 NPAP1Q9NZP6 1156 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 STX18Q9P2W9 335 aaKnown RBP9.36□□□□□ -0.91
LINC00239-201ENST00000556973 MGAT4BQ9UQ53 548 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 RNF115Q9Y4L5 304 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 RAI1Q7Z5J4 1906 aaPredicted RBP9.36□□□□□ -0.91
LINC00239-201ENST00000556973 CENPEQ02224 2701 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 PDZD2O15018 2839 aa9.36□□□□□ -0.91
LINC00239-201ENST00000556973 ITPR2Q14571 2701 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 A0A096LPE4 126 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 A0A1W2PPZ6 126 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 TCRBV5S2A0A599 114 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 SH3PXD2BA1X283 911 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 NPIPB13A6NJU9 1138 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 NPIPB4C9JG80 1138 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 MCIDASD6RGH6 385 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 ACOT8O14734 319 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 KRT36O76013 467 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 ATE1O95260 518 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 IGHG1P01857 330 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 PGA4P0DJD7 388 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 PGA3P0DJD8 388 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 ACADSP16219 412 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 ATP6V1B2P21281 511 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 CD40P25942 277 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 GPR4P46093 362 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 OMPP47874 163 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 CSNK1A1P48729 337 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 ZNF83P51522 516 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 HMGA2P52926 109 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 SPIBQ01892 262 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 FHL1Q13642 323 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 MELKQ14680 651 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 HIST3H3Q16695 136 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 TBRG1Q3YBR2 411 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 FAM98BQ52LJ0 330 aaKnown RBP9.35□□□□□ -0.91
LINC00239-201ENST00000556973 ARMC4Q5T2S8 1044 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 PGM2L1Q6PCE3 622 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 C20orf204Q6ZNR8 217 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 ZNF627Q7L945 461 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 WDFY1Q8IWB7 410 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 DEPDC4Q8N2C3 294 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 OR4K5Q8NGD3 323 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 OR52J3Q8NH60 311 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 OR51A7Q8NH64 312 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 LILRB1Q8NHL6 650 aaPredicted RBP9.35□□□□□ -0.91
LINC00239-201ENST00000556973 ASB10Q8WXI3 467 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 PIGTQ969N2 578 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 CLPTM1LQ96KA5 538 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 ALPK1Q96QP1 1244 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 FUZQ9BT04 418 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 C1QTNF6Q9BXI9 259 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms