RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 TRAM1Q15629 374 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 TBC1D25Q3MII6 688 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 C22orf42Q6IC83 251 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 SSX6Q7RTT6 188 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 OR6V1Q8N148 313 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 SMAP2Q8WU79 429 aaPredicted RBP13.24□□□□□ -0.29
VPS33B-205ENST00000556096 SLC25A43Q8WUT9 341 aaPredicted RBP13.24□□□□□ -0.29
VPS33B-205ENST00000556096 THAP4Q8WY91 577 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 TSSK2Q96PF2 358 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 SRA1Q9HD15 236 aaKnown RBP13.24□□□□□ -0.29
VPS33B-205ENST00000556096 CHST11Q9NPF2 352 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 ALKBH4Q9NXW9 302 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 VSX1Q9NZR4 365 aaPredicted RBP13.24□□□□□ -0.29
VPS33B-205ENST00000556096 B3GALT5Q9Y2C3 310 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 FKBP7Q9Y680 259 aa13.24□□□□□ -0.29
VPS33B-205ENST00000556096 SIRT4Q9Y6E7 314 aaPredicted RBP13.24□□□□□ -0.29
VPS33B-205ENST00000556096 PRSS37A4D1T9 235 aa13.23□□□□□ -0.29
VPS33B-205ENST00000556096 MASP2O00187 686 aa13.23□□□□□ -0.29
VPS33B-205ENST00000556096 SELENOFO60613 162 aa13.23□□□□□ -0.29
VPS33B-205ENST00000556096 IL11P20809 199 aa13.23□□□□□ -0.29
VPS33B-205ENST00000556096 CENPAP49450 140 aa13.23□□□□□ -0.29
VPS33B-205ENST00000556096 RORCP51449 518 aa13.23□□□□□ -0.29
VPS33B-205ENST00000556096 HCCSP53701 268 aa13.23□□□□□ -0.29
VPS33B-205ENST00000556096 SELENBP1Q13228 472 aa13.23□□□□□ -0.29
VPS33B-205ENST00000556096 JMJD6Q6NYC1 403 aaPredicted RBP13.23□□□□□ -0.29
VPS33B-205ENST00000556096 RAB43Q86YS6 212 aa13.23□□□□□ -0.29
VPS33B-205ENST00000556096 TIGD4Q8IY51 512 aa13.23□□□□□ -0.29
VPS33B-205ENST00000556096 GTPBP8Q8N3Z3 284 aaPredicted RBP13.23□□□□□ -0.29
VPS33B-205ENST00000556096 MFSD4AQ8N468 514 aa13.23□□□□□ -0.29
VPS33B-205ENST00000556096 ADPRHL1Q8NDY3 354 aa13.23□□□□□ -0.29
VPS33B-205ENST00000556096 TMEM41AQ96HV5 264 aa13.23□□□□□ -0.29
VPS33B-205ENST00000556096 MNTQ99583 582 aa13.23□□□□□ -0.29
VPS33B-205ENST00000556096 MARCH7Q9H992 704 aa13.23□□□□□ -0.29
VPS33B-205ENST00000556096 POLHQ9Y253 713 aa13.23□□□□□ -0.29
VPS33B-205ENST00000556096 PEX16Q9Y5Y5 336 aa13.23□□□□□ -0.29
VPS33B-205ENST00000556096 A6NIZ1 184 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 E9PI62 339 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 STMND1H3BQB6 276 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 H7C1C5 153 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 DCTN6O00399 190 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 GABRPO00591 440 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 OGG1O15527 345 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 LRRTM2O43300 516 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 CD1AP06126 327 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 BMP4P12644 408 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 LIFP15018 202 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 GBX2P52951 348 aaPredicted RBP13.22□□□□□ -0.29
VPS33B-205ENST00000556096 BLVRAP53004 296 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 DSCR4P56555 118 aaPredicted RBP13.22□□□□□ -0.29
VPS33B-205ENST00000556096 RAP1BP61224 184 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 LCN6P62502 163 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 RAP1AP62834 184 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 ACER2Q5QJU3 275 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 ZNF511Q8NB15 262 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 OR1J4Q8NGS1 313 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 SNX33Q8WV41 574 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 TMED9Q9BVK6 235 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 NUAK2Q9H093 628 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 SYT4Q9H2B2 425 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 CRNNQ9UBG3 495 aaPredicted RBP13.22□□□□□ -0.29
VPS33B-205ENST00000556096 COPS3Q9UNS2 423 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 B3GNT3Q9Y2A9 372 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 MSRB2Q9Y3D2 182 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 HDGFL3Q9Y3E1 203 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 CEP295Q9C0D2 2601 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 LOC101059948A0A1B0GTJ6 334 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 A0A1W2PNV4 684 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 FAM171A2A8MVW0 826 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 H3BML4 177 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 RGS9O75916 674 aaPredicted RBP13.22□□□□□ -0.29
VPS33B-205ENST00000556096 CDRT1O95170 752 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 PLGP00747 810 aaPredicted RBP13.22□□□□□ -0.29
VPS33B-205ENST00000556096 DAP3P51398 398 aaKnown RBP13.22□□□□□ -0.29
VPS33B-205ENST00000556096 TLE3Q04726 772 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 MYBPHQ13203 477 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 INAQ16352 499 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 GLYR1Q49A26 553 aaPredicted RBP13.22□□□□□ -0.29
VPS33B-205ENST00000556096 ZNF468Q5VIY5 522 aaPredicted RBP13.22□□□□□ -0.29
VPS33B-205ENST00000556096 FAM205BPQ63HN1 556 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 TIGD3Q6B0B8 471 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 DMKNQ6E0U4 476 aaPredicted RBP13.22□□□□□ -0.29
VPS33B-205ENST00000556096 TUBA3EQ6PEY2 450 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 KCTD20Q7Z5Y7 419 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 PXKQ7Z7A4 578 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 CDC20BQ86Y33 519 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 PM20D2Q8IYS1 436 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 RFLNBQ8N5W9 214 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 ADAMTS17Q8TE56 1095 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 PSMF1Q92530 271 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 SLC25A46Q96AG3 418 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 DTNBP1Q96EV8 351 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 PELI1Q96FA3 418 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 IP6K3Q96PC2 410 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 HDHD5Q9BXW7 423 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 BARHL1Q9BZE3 327 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 C6orf62Q9GZU0 229 aaPredicted RBP13.22□□□□□ -0.29
VPS33B-205ENST00000556096 SNTG1Q9NSN8 517 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 SACM1LQ9NTJ5 587 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 GALNT8Q9NY28 637 aa13.22□□□□□ -0.29
VPS33B-205ENST00000556096 ST6GALNAC2Q9UJ37 374 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms