RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 TP53INP1Q96A56 240 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 KCTD12Q96CX2 325 aaKnown RBP10.04□□□□□ -0.8
SHMT2-216ENST00000554975 ZG16BQ96DA0 208 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 C1GALT1C1Q96EU7 318 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 SCMH1Q96GD3 660 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 TXNDC15Q96J42 360 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 SECISBP2Q96T21 854 aaKnown RBP10.04□□□□□ -0.8
SHMT2-216ENST00000554975 LPAR4Q99677 370 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 IFT27Q9BW83 186 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 LANCL2Q9NS86 450 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 SNTG1Q9NSN8 517 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 HAO2Q9NYQ3 351 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 COQ3Q9NZJ6 369 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 LRFN1Q9P244 771 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 KCNN3Q9UGI6 736 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 CBLCQ9ULV8 474 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 GPR52Q9Y2T5 361 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 OR10H1Q9Y4A9 318 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 ARHGAP21Q5T5U3 1957 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 A0A1B0GWA3 101 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 GXYLT2A0PJZ3 443 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 A8MUA0 341 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 NPIPB9F8W1W9 429 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 CASKO14936 926 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 IDH3BO43837 385 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 TMEM127O75204 238 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 CTAG2O75638 210 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 LYPD3O95274 346 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 THY1P04216 161 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 ADRA2AP08913 450 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 CT62P0C5K7 136 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 PNMTP11086 282 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 PEPDP12955 493 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 MAOAP21397 527 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 CD96P40200 585 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 DCAF7P61962 342 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 BTG2P78543 158 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 PSG6Q00889 435 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 SCN1BQ07699 218 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 FUT7Q11130 342 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 HNRNPA0Q13151 305 aaKnown RBP10.03□□□□□ -0.8
SHMT2-216ENST00000554975 OR1C1Q15619 314 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 MAPK14Q16539 360 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 PDZK1Q5T2W1 519 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 ZNF322Q6U7Q0 402 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-216ENST00000554975 RTL4Q6ZR62 310 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 GALNTL5Q7Z4T8 443 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 BIVMQ86UB2 503 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 CD163Q86VB7 1156 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 CPOQ8IVL8 374 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 ZNF485Q8NCK3 441 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 TMEM52Q8NDY8 209 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 PLPP5Q8NEB5 264 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 ATP6V1C2Q8NEY4 427 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 LILRB4Q8NHJ6 448 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 CHAC2Q8WUX2 184 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 SGTBQ96EQ0 304 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 C12orf10Q9HB07 376 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 EXOSC3Q9NQT5 275 aaKnown RBP10.03□□□□□ -0.8
SHMT2-216ENST00000554975 TEKT2Q9UIF3 430 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 SIGLEC7Q9Y286 467 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 SLC6A5Q9Y345 797 aa10.03□□□□□ -0.8
SHMT2-216ENST00000554975 SF3B6Q9Y3B4 125 aaKnown RBP10.03□□□□□ -0.8
SHMT2-216ENST00000554975 DAPL1A0PJW8 107 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 SERINC4A6NH21 518 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 C12orf71A8MTZ7 269 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 CDC42EP2O14613 210 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 PRRG2O14669 202 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 CH25HO95992 272 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 SERPINA3P01011 423 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 MYL9P24844 172 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 NOS3P29474 1203 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 TNFSF8P32971 234 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 SOX18P35713 384 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 RPS19P39019 145 aaKnown RBP10.02□□□□□ -0.81
SHMT2-216ENST00000554975 SLC6A8P48029 635 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 MTNR1BP49286 362 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 MEOX1P50221 254 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 EMDP50402 254 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 RNF144AP50876 292 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-216ENST00000554975 NR0B1P51843 470 aaKnown RBP10.02□□□□□ -0.81
SHMT2-216ENST00000554975 DLX5P56178 289 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 RPS7P62081 194 aaKnown RBP10.02□□□□□ -0.81
SHMT2-216ENST00000554975 RPS25P62851 125 aaKnown RBP10.02□□□□□ -0.81
SHMT2-216ENST00000554975 HOXC5Q00444 222 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 IFITM3Q01628 133 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 HSF2Q03933 536 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 SNTB1Q13884 538 aaKnown RBP10.02□□□□□ -0.81
SHMT2-216ENST00000554975 GALEQ14376 348 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 EXT1Q16394 746 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 SLC35D3Q5M8T2 416 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 ACER2Q5QJU3 275 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 OR2G6Q5TZ20 316 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 C22orf42Q6IC83 251 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 PLBD1Q6P4A8 553 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 PAQR6Q6TCH4 344 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 BCDIN3DQ7Z5W3 292 aaKnown RBP10.02□□□□□ -0.81
SHMT2-216ENST00000554975 EGFL6Q8IUX8 553 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 OR13C2Q8NGS9 318 aa10.02□□□□□ -0.81
SHMT2-216ENST00000554975 NEIL3Q8TAT5 605 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms