RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 IDUAP35475 653 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 OR1E2P47887 323 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 SPIBQ01892 262 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 SWT1Q5T5J6 900 aaKnown RBP9.29□□□□□ -0.92
SHMT2-215ENST00000554656 TTC23Q5W5X9 447 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 FAHD1Q6P587 224 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 GALNT5Q7Z7M9 940 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 TMEM179BQ7Z7N9 219 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 CCDC103Q8IW40 242 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 OFCC1Q8IZS5 231 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 DHRSXQ8N5I4 330 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 OR4C15Q8NGM1 316 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 GIPC3Q8TF64 312 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 SLC25A43Q8WUT9 341 aaPredicted RBP9.29□□□□□ -0.92
SHMT2-215ENST00000554656 TFAP2CQ92754 450 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 PRRC1Q96M27 445 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 ZNF570Q96NI8 536 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 USB1Q9BQ65 265 aaKnown RBP9.29□□□□□ -0.92
SHMT2-215ENST00000554656 ADI1Q9BV57 179 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 RSPO3Q9BXY4 272 aaPredicted RBP9.29□□□□□ -0.92
SHMT2-215ENST00000554656 ANKRD60Q9BZ19 345 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 GRIP2Q9C0E4 1043 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 VNN3Q9NY84 501 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 ENOPH1Q9UHY7 261 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 B3GALT5Q9Y2C3 310 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 SLC25A15Q9Y619 301 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 MALRD1Q5VYJ5 2156 aa9.29□□□□□ -0.92
SHMT2-215ENST00000554656 A0A1W2PRQ8 180 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 CD5LO43866 347 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 DIRAS1O95057 198 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 GADD45GO95257 159 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 PMS2P2O95744 297 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 H1F0P07305 194 aaKnown RBP9.28□□□□□ -0.92
SHMT2-215ENST00000554656 TFPIP10646 304 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 TNFRSF1BP20333 461 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 RYKP34925 604 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 CAPGP40121 348 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 ZNF83P51522 516 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 SLC16A1P53985 500 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 CSNK2A1P68400 391 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-215ENST00000554656 DGCR6Q14129 220 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 PDK3Q15120 406 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 MICAQ29983 383 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 SLC36A3Q495N2 470 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 OTUD3Q5T2D3 398 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-215ENST00000554656 FBXW9Q5XUX1 488 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 KDM4DQ6B0I6 523 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 TBPL2Q6SJ96 375 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 ZNF836Q6ZNA1 936 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 VRK2Q86Y07 508 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 ADGRG3Q86Y34 549 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 ZNF100Q8IYN0 542 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 WDR31Q8NA23 367 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 OR52N5Q8NH56 324 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 MAGEE2Q8TD90 523 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-215ENST00000554656 TMEM234Q8WY98 164 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 CNOT9Q92600 299 aaKnown RBP9.28□□□□□ -0.92
SHMT2-215ENST00000554656 HTRA1Q92743 480 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 MUCL1Q96DR8 90 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 CACNG6Q9BXT2 260 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-215ENST00000554656 MALT1Q9UDY8 824 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 CHRNA9Q9UGM1 479 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 TMCC3Q9ULS5 477 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 SLC35A3Q9Y2D2 325 aa9.28□□□□□ -0.92
SHMT2-215ENST00000554656 NOSIPQ9Y314 301 aaKnown RBP9.28□□□□□ -0.92
SHMT2-215ENST00000554656 ZC3H12DA2A288 527 aaKnown RBP9.27□□□□□ -0.93
SHMT2-215ENST00000554656 CDHR4A6H8M9 788 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 FAAHO00519 579 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 SLC16A6O15403 523 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 SSX4O60224 188 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 GPRIN2O60269 458 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 OR5F1O95221 314 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 IMPDH2P12268 514 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 MYF6P23409 242 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 IGFBP5P24593 272 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 CD40P25942 277 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 APOBEC1P41238 236 aaKnown RBP9.27□□□□□ -0.93
SHMT2-215ENST00000554656 CDH12P55289 794 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 RGS8P57771 180 aaPredicted RBP9.27□□□□□ -0.93
SHMT2-215ENST00000554656 ADARB1P78563 741 aaKnown RBP9.27□□□□□ -0.93
SHMT2-215ENST00000554656 H3F3AP84243 136 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 IL18R1Q13478 541 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 DEF8Q6ZN54 512 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 USP51Q70EK9 711 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 GRINAQ7Z429 371 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 RANBP3LQ86VV4 465 aaPredicted RBP9.27□□□□□ -0.93
SHMT2-215ENST00000554656 P2RY8Q86VZ1 359 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 ZNF440Q8IYI8 595 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 OR10H5Q8NGA6 315 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 OR10G2Q8NGC3 310 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 OR4D11Q8NGI4 311 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 OR6T1Q8NGN1 323 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 SPATA3Q8NHX4 192 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 APH1AQ96BI3 265 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 HS6ST2Q96MM7 605 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 FUZQ9BT04 418 aa9.27□□□□□ -0.93
SHMT2-215ENST00000554656 NMNAT1Q9HAN9 279 aaPredicted RBP9.27□□□□□ -0.93
SHMT2-215ENST00000554656 EXOSC3Q9NQT5 275 aaKnown RBP9.27□□□□□ -0.93
SHMT2-215ENST00000554656 YAE1D1Q9NRH1 226 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms