RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 C6orf223Q8N319 242 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 OR52H1Q8NGJ2 320 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 LINC01006Q8NI28 216 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 ANKRD49Q8WVL7 239 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 MRPS31Q92665 395 aaKnown RBP3.57□□□□□ -1.84
CHD8-207ENST00000554384 SLC41A3Q96GZ6 507 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 B3GALT6Q96L58 329 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 TSG101Q99816 390 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 ARHGDIGQ99819 225 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 COA1Q9GZY4 146 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 RNF167Q9H6Y7 350 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 OTOFQ9HC10 1997 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 ABCB10Q9NRK6 738 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 KIF25Q9UIL4 384 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 USP24Q9UPU5 2620 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 KIF20BQ96Q89 1820 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 LAMB1P07942 1786 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 DDX60Q8IY21 1712 aaKnown RBP3.56□□□□□ -1.84
CHD8-207ENST00000554384 RPAP1Q9BWH6 1393 aaPredicted RBP3.56□□□□□ -1.84
CHD8-207ENST00000554384 MED23Q9ULK4 1368 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 A0A0G2JLM5 398 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 A0A1B0GVL5 298 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 A6NIZ1 184 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 IDSB3KWA1 339 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 F5H6K3 240 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 NBR2O15453 112 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 RAMP3O60896 148 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 MMP23AO75900 390 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 SUPT7LO94864 414 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 AP2A1O95782 977 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 DNAH10OSP0CZ25 163 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 POU2F1P14859 743 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 COX5AP20674 150 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 CALRP27797 417 aaKnown RBP3.56□□□□□ -1.84
CHD8-207ENST00000554384 NBL1P41271 181 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 CCT3P49368 545 aaKnown RBP3.56□□□□□ -1.84
CHD8-207ENST00000554384 KLK7P49862 253 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 RAP1BP61224 184 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 KLRC3Q07444 240 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 PLD1Q13393 1074 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 MESDQ14696 234 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 ARL6IP1Q15041 203 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 PDK3Q15120 406 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 LRRC23Q53EV4 343 aaPredicted RBP3.56□□□□□ -1.84
CHD8-207ENST00000554384 KLF17Q5JT82 389 aaPredicted RBP3.56□□□□□ -1.84
CHD8-207ENST00000554384 C1orf220Q5T0J3 134 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 COPS6Q7L5N1 327 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 NLRP9Q7RTR0 991 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 PRR22Q8IZ63 422 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 OR2L5Q8NG80 312 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 OR2AP1Q8NGE2 309 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 ZNF606Q8WXB4 792 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 OR1E3Q8WZA6 343 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 FRAT1Q92837 279 aaPredicted RBP3.56□□□□□ -1.84
CHD8-207ENST00000554384 UBE2E3Q969T4 207 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 EFHD2Q96C19 240 aaPredicted RBP3.56□□□□□ -1.84
CHD8-207ENST00000554384 CMTM7Q96FZ5 175 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 CCT7Q99832 543 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 EBF4Q9BQW3 602 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 MRPL45Q9BRJ2 306 aaKnown RBP3.56□□□□□ -1.84
CHD8-207ENST00000554384 UPF3BQ9BZI7 483 aaKnown RBP3.56□□□□□ -1.84
CHD8-207ENST00000554384 RBKSQ9H477 322 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 YY1AP1Q9H869 796 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 PDFQ9HBH1 243 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 THUMPD1Q9NXG2 353 aaKnown RBP3.56□□□□□ -1.84
CHD8-207ENST00000554384 ADAM28Q9UKQ2 775 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 GVINP1Q7Z2Y8 2422 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 PRRC2BQ5JSZ5 2229 aaKnown RBP3.56□□□□□ -1.84
CHD8-207ENST00000554384 MAST2Q6P0Q8 1798 aa3.56□□□□□ -1.84
CHD8-207ENST00000554384 FAM186AA6NE01 2351 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 CACNA1HO95180 2353 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 DMXL1Q9Y485 3027 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 MYO9BQ13459 2157 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 TCRBV9S1A1TA0A576 114 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 USP27XA6NNY8 438 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 MPHOSPH10O00566 681 aaKnown RBP3.55□□□□□ -1.84
CHD8-207ENST00000554384 CXCL11O14625 94 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 POLR2DO15514 142 aaKnown RBP3.55□□□□□ -1.84
CHD8-207ENST00000554384 EMC8O43402 210 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 PRKAB2O43741 272 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 ACTL6AO96019 429 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 HSMCR30P0CW71 290 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 EIF2S2P20042 333 aaKnown RBP3.55□□□□□ -1.84
CHD8-207ENST00000554384 SHMT2P34897 504 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 UGT1A5P35504 534 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 RPL13AP40429 203 aaKnown RBP3.55□□□□□ -1.84
CHD8-207ENST00000554384 HNRNPA3P51991 378 aaKnown RBP3.55□□□□□ -1.84
CHD8-207ENST00000554384 PLK1P53350 603 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 PKNOX1P55347 436 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 TNFRSF17Q02223 184 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 IL17AQ16552 155 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 DPYSL2Q16555 572 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 DUSP7Q16829 419 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 HSP90AB3PQ58FF7 597 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 MFSD14CQ5VZR4 134 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 PGAP1Q75T13 922 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 CCDC50Q8IVM0 306 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 FTMTQ8N4E7 242 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 TRPV1Q8NER1 839 aa3.55□□□□□ -1.84
CHD8-207ENST00000554384 OR9A1PQ8NGU1 263 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms