RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 GKN3PP0CG01 181 aa14.65□□□□□ -0.06
NEK9-204ENST00000554258 PRG2P13727 222 aa14.65□□□□□ -0.06
NEK9-204ENST00000554258 DAOP14920 347 aa14.65□□□□□ -0.06
NEK9-204ENST00000554258 PGCP20142 388 aa14.65□□□□□ -0.06
NEK9-204ENST00000554258 IL13RA1P78552 427 aa14.65□□□□□ -0.06
NEK9-204ENST00000554258 CBFBQ13951 182 aa14.65□□□□□ -0.06
NEK9-204ENST00000554258 NPTX1Q15818 432 aa14.65□□□□□ -0.06
NEK9-204ENST00000554258 LSMEM1Q8N8F7 131 aa14.65□□□□□ -0.06
NEK9-204ENST00000554258 LZICQ8WZA0 190 aa14.65□□□□□ -0.06
NEK9-204ENST00000554258 OSTF1Q92882 214 aa14.65□□□□□ -0.06
NEK9-204ENST00000554258 PYURFQ96I23 114 aa14.65□□□□□ -0.06
NEK9-204ENST00000554258 MMP27Q9H306 513 aa14.65□□□□□ -0.06
NEK9-204ENST00000554258 MED17Q9NVC6 651 aa14.65□□□□□ -0.06
NEK9-204ENST00000554258 VDAC3Q9Y277 283 aa14.65□□□□□ -0.06
NEK9-204ENST00000554258 LOC105371242A0A075B767 164 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 A0A0J9YW62 118 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 AP3D1O14617 1153 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 FRS3O43559 492 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 PRKD3O94806 890 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 SEMG1P04279 462 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 YES1P07947 543 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 ZNF17P17021 662 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 IGHV1-2P23083 117 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 PSMA4P25789 261 aaKnown RBP14.64□□□□□ -0.07
NEK9-204ENST00000554258 CARD18P57730 90 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 TOMM34Q15785 309 aaPredicted RBP14.64□□□□□ -0.07
NEK9-204ENST00000554258 ZNF239Q16600 458 aaKnown RBP14.64□□□□□ -0.07
NEK9-204ENST00000554258 PLPPR5Q32ZL2 321 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 CYP2R1Q6VVX0 501 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 TSEN54Q7Z6J9 526 aaKnown RBP14.64□□□□□ -0.07
NEK9-204ENST00000554258 VTCN1Q7Z7D3 282 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 CARM1Q86X55 608 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 FAM86B1Q8N7N1 296 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 OR6T1Q8NGN1 323 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 POC1BQ8TC44 478 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 ST8SIA1Q92185 356 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 C7orf34Q96L11 122 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 TMEM185BQ9H7F4 350 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 GP6Q9HCN6 339 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 ACER3Q9NUN7 267 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 SLC13A4Q9UKG4 626 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 SLC9A8Q9Y2E8 581 aa14.64□□□□□ -0.07
NEK9-204ENST00000554258 TCRBV3S1A0A5B6 114 aa14.63□□□□□ -0.07
NEK9-204ENST00000554258 PIN1P1O15428 100 aa14.63□□□□□ -0.07
NEK9-204ENST00000554258 RAD51DO75771 328 aa14.63□□□□□ -0.07
NEK9-204ENST00000554258 CYP7B1O75881 506 aa14.63□□□□□ -0.07
NEK9-204ENST00000554258 ZNF682O95780 498 aa14.63□□□□□ -0.07
NEK9-204ENST00000554258 MSMBP08118 114 aa14.63□□□□□ -0.07
NEK9-204ENST00000554258 IFNGR1P15260 489 aa14.63□□□□□ -0.07
NEK9-204ENST00000554258 PRKCAP17252 672 aa14.63□□□□□ -0.07
NEK9-204ENST00000554258 COX5AP20674 150 aa14.63□□□□□ -0.07
NEK9-204ENST00000554258 GCH1P30793 250 aa14.63□□□□□ -0.07
NEK9-204ENST00000554258 OR3A2P47893 321 aa14.63□□□□□ -0.07
NEK9-204ENST00000554258 RGS8P57771 180 aaPredicted RBP14.63□□□□□ -0.07
NEK9-204ENST00000554258 SESN3P58005 492 aa14.63□□□□□ -0.07
NEK9-204ENST00000554258 QPRTQ15274 297 aa14.63□□□□□ -0.07
NEK9-204ENST00000554258 IFI44LQ53G44 452 aa14.63□□□□□ -0.07
NEK9-204ENST00000554258 RBM45Q8IUH3 476 aaKnown RBP14.63□□□□□ -0.07
NEK9-204ENST00000554258 GTPBP8Q8N3Z3 284 aaPredicted RBP14.63□□□□□ -0.07
NEK9-204ENST00000554258 GEMIN6Q8WXD5 167 aaKnown RBP14.63□□□□□ -0.07
NEK9-204ENST00000554258 TPD52L3Q96J77 140 aa14.63□□□□□ -0.07
NEK9-204ENST00000554258 HSH2DQ96JZ2 352 aa14.63□□□□□ -0.07
NEK9-204ENST00000554258 C1QTNF6Q9BXI9 259 aa14.63□□□□□ -0.07
NEK9-204ENST00000554258 TRIM15Q9C019 465 aa14.63□□□□□ -0.07
NEK9-204ENST00000554258 TESQ9UGI8 421 aaKnown RBP14.63□□□□□ -0.07
NEK9-204ENST00000554258 SH3GLB1Q9Y371 365 aa14.63□□□□□ -0.07
NEK9-204ENST00000554258 SLC25A15Q9Y619 301 aa14.63□□□□□ -0.07
NEK9-204ENST00000554258 A0A1W2PR80 420 aa14.62□□□□□ -0.07
NEK9-204ENST00000554258 M0R3H8 397 aa14.62□□□□□ -0.07
NEK9-204ENST00000554258 NQO1P15559 274 aaKnown RBP14.62□□□□□ -0.07
NEK9-204ENST00000554258 TNFRSF1BP20333 461 aa14.62□□□□□ -0.07
NEK9-204ENST00000554258 HTR2AP28223 471 aa14.62□□□□□ -0.07
NEK9-204ENST00000554258 RYKP34925 604 aa14.62□□□□□ -0.07
NEK9-204ENST00000554258 EIF1P41567 113 aaKnown RBP14.62□□□□□ -0.07
NEK9-204ENST00000554258 SLC1A3P43003 542 aa14.62□□□□□ -0.07
NEK9-204ENST00000554258 IDH2P48735 452 aaKnown RBP14.62□□□□□ -0.07
NEK9-204ENST00000554258 RAC1P63000 192 aa14.62□□□□□ -0.07
NEK9-204ENST00000554258 HOXC5Q00444 222 aa14.62□□□□□ -0.07
NEK9-204ENST00000554258 FLOT2Q14254 428 aa14.62□□□□□ -0.07
NEK9-204ENST00000554258 WBP2NLQ6ICG8 309 aa14.62□□□□□ -0.07
NEK9-204ENST00000554258 C1orf229Q6ZS94 237 aaPredicted RBP14.62□□□□□ -0.07
NEK9-204ENST00000554258 TMCO5AQ8N6Q1 288 aa14.62□□□□□ -0.07
NEK9-204ENST00000554258 TMEM234Q8WY98 164 aa14.62□□□□□ -0.07
NEK9-204ENST00000554258 MRGPRX4Q96LA9 322 aa14.62□□□□□ -0.07
NEK9-204ENST00000554258 NPAS1Q99742 590 aa14.62□□□□□ -0.07
NEK9-204ENST00000554258 POLR2J2Q9GZM3 115 aaKnown RBP14.62□□□□□ -0.07
NEK9-204ENST00000554258 RAB1BQ9H0U4 201 aa14.62□□□□□ -0.07
NEK9-204ENST00000554258 POLR2J3Q9H1A7 115 aaKnown RBP14.62□□□□□ -0.07
NEK9-204ENST00000554258 NTN4Q9HB63 628 aa14.62□□□□□ -0.07
NEK9-204ENST00000554258 EPPK1P58107 5090 aaKnown RBP14.62□□□□□ -0.07
NEK9-204ENST00000554258 CIB4A0PJX0 185 aa14.61□□□□□ -0.07
NEK9-204ENST00000554258 ATP6V1G2-DDX39BF2Z307 99 aa14.61□□□□□ -0.07
NEK9-204ENST00000554258 EFNA2O43921 213 aa14.61□□□□□ -0.07
NEK9-204ENST00000554258 PNPP00491 289 aa14.61□□□□□ -0.07
NEK9-204ENST00000554258 UMPSP11172 480 aa14.61□□□□□ -0.07
NEK9-204ENST00000554258 UQCRBP14927 111 aa14.61□□□□□ -0.07
NEK9-204ENST00000554258 OR1E2P47887 323 aa14.61□□□□□ -0.07
NEK9-204ENST00000554258 CCR4P51679 360 aa14.61□□□□□ -0.07
NEK9-204ENST00000554258 RASGEF1BQ0VAM2 473 aa14.61□□□□□ -0.07
NEK9-204ENST00000554258 FKBP9P1Q75LS8 142 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms