RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 BHLHE40O14503 412 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 MRPL33O75394 65 aaKnown RBP13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 UPK3AO75631 287 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 CNOT4O95628 575 aaKnown RBP13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 CLDN1O95832 211 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 TXNDC12O95881 172 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 PGA4P0DJD7 388 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 PGA3P0DJD8 388 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 ANXA8P13928 327 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 IGFBP2P18065 325 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 COX5AP20674 150 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 ASCL1P50553 236 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 CTXN1P60606 82 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 COX10Q12887 443 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 C1DQ13901 141 aaKnown RBP13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 MELKQ14680 651 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 CASP12Q6UXS9 341 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 C20orf196Q8IYI0 205 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 PARP8Q8N3A8 854 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 CA5BP1Q8WTZ4 195 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 APH1AQ96BI3 265 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 SAMD8Q96LT4 415 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 KATNB1Q9BVA0 655 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 LINC00470Q9BZP3 86 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 SLCO5A1Q9H2Y9 848 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 SMURF2Q9HAU4 748 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 PARPBPQ9NWS1 579 aa13.1□□□□□ -0.31
MTHFD1-204ENST00000553405 SAC3D1A6NKF1 404 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 EEF1E1-BLOC1S5C9J1V9 151 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 E9PQ18 207 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 C19orf84I3L1E1 186 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 ARPC3O15145 178 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 EEF1E1O43324 174 aaKnown RBP13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 SERPINI2O75830 405 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 SMNDC1O75940 238 aaKnown RBP eCLIP13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 IGHV3-9P01782 118 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 ITGA5P08648 1049 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 APEHP13798 732 aaKnown RBP13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 ANPEPP15144 967 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 ZNF23P17027 643 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 GSTM3P21266 225 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 ZNF133P52736 654 aaPredicted RBP13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 BIDP55957 195 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 RPL27P61353 136 aaKnown RBP13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 ERVK-25P63136 954 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 RCN1Q15293 331 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 TAF11Q15544 211 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 MESTQ5EB52 335 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 ZNF362Q5T0B9 420 aaPredicted RBP13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 FBXW9Q5XUX1 488 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 NIPAL3Q6P499 406 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 DPY19L2P2Q6ZN68 376 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 Q6ZT83 130 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 LUZP2Q86TE4 346 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 STK32CQ86UX6 486 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 ZDHHC13Q8IUH4 622 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 OR4Q3Q8NH05 313 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 HDAC2Q92769 488 aaKnown RBP13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 TMEM54Q969K7 222 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 SLC25A44Q96H78 314 aaPredicted RBP13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 LRR1Q96L50 414 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 Q96M85 177 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 ADAD1Q96M93 576 aaKnown RBP13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 PSMG3-AS1Q96PY0 264 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 KCNK17Q96T54 332 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 OSBPL10Q9BXB5 764 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 KCNJ16Q9NPI9 418 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 GALNT8Q9NY28 637 aa13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 ZNF346Q9UL40 294 aaKnown RBP13.09□□□□□ -0.31
MTHFD1-204ENST00000553405 DCHS2Q6V1P9 2916 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 A0A1W2PRG6 482 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 CENPBD1B2RD01 187 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 RPL36A-HNRNPH2H7BZ11 118 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 MITFO75030 526 aaPredicted RBP13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 TRMUO75648 421 aaKnown RBP13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 SOX14O95416 240 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 BCL10O95999 233 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 ALPLP05186 524 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 DAP3P51398 398 aaKnown RBP13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 IL1RL1Q01638 556 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 FAM27E3Q08E93 113 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 CAMK2DQ13557 499 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 SLC36A3Q495N2 470 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 LRFN4Q6PJG9 635 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 STAC2Q6ZMT1 411 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 ZNF771Q7L3S4 317 aaPredicted RBP13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 ZNF100Q8IYN0 542 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 ARIH2OSQ8N7S6 290 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 POMGNT2Q8NAT1 580 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 ICA1LQ8NDH6 482 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 DNAJC9Q8WXX5 260 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 STMN2Q93045 179 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 RNASE6Q93091 150 aaKnown RBP13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 ZNF837Q96EG3 531 aaPredicted RBP13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 DDOQ99489 341 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 SLC29A1Q99808 456 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 POLDIP3Q9BY77 421 aaKnown RBP13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 USE1Q9NZ43 259 aa13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 STX18Q9P2W9 335 aaKnown RBP13.08□□□□□ -0.32
MTHFD1-204ENST00000553405 NKX1-2Q9UD57 310 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms