RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 CCDC175P0C221 793 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 FAM58BPP0C7Q3 252 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 CECR9P0C854 216 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 IGHV4-38-2P0DP08 117 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 CSNK2A2P19784 350 aaPredicted RBP1.87□□□□□ -2.11
PTCH1-223ENST00000551623 COL8A2P25067 703 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 PIK3R1P27986 724 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 IL12BP29460 328 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 CALCRP30988 508 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 LCN1P31025 176 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 TIA1P31483 386 aaKnown RBP eCLIP1.87□□□□□ -2.11
PTCH1-223ENST00000551623 CD80P33681 288 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 KRT20P35900 424 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 MAP3K8P41279 467 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 SLC1A2P43004 574 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 MAGEA3P43357 314 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 ASMTP46597 345 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 XKP51811 444 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 CDKN2DP55273 166 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 SELENOVP59797 346 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 SARNPP82979 210 aaKnown RBP1.87□□□□□ -2.11
PTCH1-223ENST00000551623 ZBED6P86452 979 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 MYL5Q02045 173 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 EMX1Q04741 257 aaPredicted RBP1.87□□□□□ -2.11
PTCH1-223ENST00000551623 ZNF763Q0D2J5 394 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 TRIP13Q15645 432 aaPredicted RBP1.87□□□□□ -2.11
PTCH1-223ENST00000551623 OASLQ15646 514 aaKnown RBP1.87□□□□□ -2.11
PTCH1-223ENST00000551623 NNATQ16517 81 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 HFEQ30201 348 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 DEFB112Q30KQ8 113 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 ODF2Q5BJF6 829 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 TECRLQ5HYJ1 363 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 PAGE2BQ5JRK9 111 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 ENTPD8Q5MY95 495 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 PGBD2Q6P3X8 592 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 PPP1R21Q6ZMI0 780 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 FRRS1Q6ZNA5 592 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 GDPGP1Q6ZNW5 385 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 RBM43Q6ZSC3 357 aaKnown RBP1.87□□□□□ -2.11
PTCH1-223ENST00000551623 RAPH1Q70E73 1250 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 IKBIPQ70UQ0 350 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 C16orf82Q7Z2V1 217 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 NUDT13Q86X67 352 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 MISPQ8IVT2 679 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 DENND6AQ8IWF6 608 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 ZNF485Q8NCK3 441 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 Q8NFD4 153 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 OR4F17Q8NGA8 305 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 OR4K14Q8NGD5 310 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 OR5M1Q8NGP8 315 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 TRPC4APQ8TEL6 797 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 ZFP90Q8TF47 636 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 DUSP19Q8WTR2 217 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 UBE2E3Q969T4 207 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 TMEM45BQ96B21 275 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 APH1AQ96BI3 265 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 LINGO1Q96FE5 620 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 SLC47A1Q96FL8 570 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 ARL5BQ96KC2 179 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 SERPINB12Q96P63 405 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 OR4F4Q96R69 305 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 ZNF300Q96RE9 604 aaPredicted RBP1.87□□□□□ -2.11
PTCH1-223ENST00000551623 OSBPL8Q9BZF1 889 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 LAT2Q9GZY6 243 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 PCDHAC1Q9H158 963 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 CCDC68Q9H2F9 335 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 WDR41Q9HAD4 459 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 TCF7L2Q9NQB0 619 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 MMP26Q9NRE1 261 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 SLC7A10Q9NS82 523 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 MED17Q9NVC6 651 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 TAS2R13Q9NYV9 303 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 BFARQ9NZS9 450 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 CHMP5Q9NZZ3 219 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 TRMT6Q9UJA5 497 aaKnown RBP1.87□□□□□ -2.11
PTCH1-223ENST00000551623 GRID1Q9ULK0 1009 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.87□□□□□ -2.11
PTCH1-223ENST00000551623 LSM4Q9Y4Z0 139 aaKnown RBP1.87□□□□□ -2.11
PTCH1-223ENST00000551623 OARD1Q9Y530 152 aa1.87□□□□□ -2.11
PTCH1-223ENST00000551623 IGHV1-69-2A0A0G2JMI3 117 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 MDFIC2A0A1B0GVS7 189 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 A0A1W2PR80 420 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 C1orf226A1L170 272 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 MAGEB16A2A368 324 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 GLOD5A6NK44 160 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 CLDN25C9JDP6 229 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 RPL36A-HNRNPH2H7BZ11 118 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 ZNF195O14628 629 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 TAPBPO15533 448 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 PPIHO43447 177 aaKnown RBP1.86□□□□□ -2.11
PTCH1-223ENST00000551623 SCO2O43819 266 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 KRT36O76013 467 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 WISP3O95389 354 aaPredicted RBP1.86□□□□□ -2.11
PTCH1-223ENST00000551623 TTC4O95801 387 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 IGHV2-70P01814 119 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 APRTP07741 180 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 HSP90AA1P07900 732 aaKnown RBP1.86□□□□□ -2.11
PTCH1-223ENST00000551623 MLNP12872 115 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 ZNF35P13682 527 aa1.86□□□□□ -2.11
PTCH1-223ENST00000551623 CBR1P16152 277 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms