RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 NOX1Q9Y5S8 564 aa11.96□□□□□ -0.49
ERBB3-215ENST00000550828 UNC79Q9P2D8 2635 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 A0A1B0GUH1 482 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 NPIPB13A6NJU9 1138 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 NPIPB4C9JG80 1138 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 IL2RAP01589 272 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 CTSSP25774 331 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 SLC6A6P31641 620 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 BIDP55957 195 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 PRPS1P60891 318 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 C1DQ13901 141 aaKnown RBP11.95□□□□□ -0.5
ERBB3-215ENST00000550828 MESTQ5EB52 335 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 PHYHD1Q5SRE7 291 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 ZNF362Q5T0B9 420 aaPredicted RBP11.95□□□□□ -0.5
ERBB3-215ENST00000550828 TMEM236Q5W0B7 351 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 OR2A2Q6IF42 318 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 ACSM5Q6NUN0 579 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 TFAP2EQ6VUC0 442 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 DPY19L2P2Q6ZN68 376 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 PTCHD4Q6ZW05 846 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 LINGO2Q7L985 606 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 MCEMP1Q8IX19 187 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 GALNT4Q8N4A0 578 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 CNEP1R1Q8N9A8 125 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 MAGEE2Q8TD90 523 aaPredicted RBP11.95□□□□□ -0.5
ERBB3-215ENST00000550828 RND1Q92730 232 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 HDAC2Q92769 488 aaKnown RBP11.95□□□□□ -0.5
ERBB3-215ENST00000550828 SDCCAG3Q96C92 435 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 NMD3Q96D46 503 aaKnown RBP11.95□□□□□ -0.5
ERBB3-215ENST00000550828 TSSK6Q9BXA6 273 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 POLDIP3Q9BY77 421 aaKnown RBP11.95□□□□□ -0.5
ERBB3-215ENST00000550828 TXNIPQ9H3M7 391 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 C12orf49Q9H741 205 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 ZNF556Q9HAH1 456 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 GLRX2Q9NS18 164 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 PRSS50Q9UI38 385 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 ZNF346Q9UL40 294 aaKnown RBP11.95□□□□□ -0.5
ERBB3-215ENST00000550828 NOSIPQ9Y314 301 aaKnown RBP11.95□□□□□ -0.5
ERBB3-215ENST00000550828 IER3IP1Q9Y5U9 82 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 NOTCH2Q04721 2471 aa11.95□□□□□ -0.5
ERBB3-215ENST00000550828 TEX13CA0A0J9YWL9 993 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 SLC35F4A4IF30 521 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 ZAR1LA6NP61 321 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 GPR171O14626 319 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 SLC2A10O95528 541 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 SNAP29O95721 258 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 TXNDC12O95881 172 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 CRHP06850 196 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 POU1F1P28069 291 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 RPL4P36578 427 aaKnown RBP11.94□□□□□ -0.5
ERBB3-215ENST00000550828 OR3A2P47893 321 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 CRISP1P54107 249 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 FOXG1P55316 489 aaPredicted RBP11.94□□□□□ -0.5
ERBB3-215ENST00000550828 PER3P56645 1201 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 RPL27P61353 136 aaKnown RBP11.94□□□□□ -0.5
ERBB3-215ENST00000550828 CDK5Q00535 292 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 PGGHGQ32M88 737 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 ZIK1Q3SY52 487 aaPredicted RBP11.94□□□□□ -0.5
ERBB3-215ENST00000550828 CARD17Q5XLA6 110 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 GTF2IRD2BQ6EKJ0 949 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 TMEM211Q6ICI0 200 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 NIPAL3Q6P499 406 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 CASP12Q6UXS9 341 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 AAED1Q7RTV5 226 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 GTF2IRD2Q86UP8 949 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 LNX2Q8N448 690 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 OR6K3Q8NGY3 331 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 ERMAPQ96PL5 475 aaPredicted RBP11.94□□□□□ -0.5
ERBB3-215ENST00000550828 IFT27Q9BW83 186 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 SFXN3Q9BWM7 321 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 OPN3Q9H1Y3 402 aaPredicted RBP11.94□□□□□ -0.5
ERBB3-215ENST00000550828 TOR3AQ9H497 397 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 SLC25A19Q9HC21 320 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 EMC3Q9P0I2 261 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 RCE1Q9Y256 329 aa11.94□□□□□ -0.5
ERBB3-215ENST00000550828 A0A1W2PRG6 482 aa11.93□□□□□ -0.5
ERBB3-215ENST00000550828 HSPB2A8KAH6 182 aa11.93□□□□□ -0.5
ERBB3-215ENST00000550828 H3BN98 237 aa11.93□□□□□ -0.5
ERBB3-215ENST00000550828 H7C1C5 153 aa11.93□□□□□ -0.5
ERBB3-215ENST00000550828 M0R129 80 aa11.93□□□□□ -0.5
ERBB3-215ENST00000550828 ARPC3O15145 178 aa11.93□□□□□ -0.5
ERBB3-215ENST00000550828 ZG16O60844 167 aa11.93□□□□□ -0.5
ERBB3-215ENST00000550828 UPK3AO75631 287 aa11.93□□□□□ -0.5
ERBB3-215ENST00000550828 TRMUO75648 421 aaKnown RBP11.93□□□□□ -0.5
ERBB3-215ENST00000550828 IL18BPO95998 194 aa11.93□□□□□ -0.5
ERBB3-215ENST00000550828 IGHV3-9P01782 118 aa11.93□□□□□ -0.5
ERBB3-215ENST00000550828 PGA4P0DJD7 388 aa11.93□□□□□ -0.5
ERBB3-215ENST00000550828 PGA3P0DJD8 388 aa11.93□□□□□ -0.5
ERBB3-215ENST00000550828 APEHP13798 732 aaKnown RBP11.93□□□□□ -0.5
ERBB3-215ENST00000550828 SDHAP31040 664 aa11.93□□□□□ -0.5
ERBB3-215ENST00000550828 DAP3P51398 398 aaKnown RBP11.93□□□□□ -0.5
ERBB3-215ENST00000550828 LCN6P62502 163 aa11.93□□□□□ -0.5
ERBB3-215ENST00000550828 CAMK2DQ13557 499 aa11.93□□□□□ -0.5
ERBB3-215ENST00000550828 KRR1Q13601 381 aaKnown RBP11.93□□□□□ -0.5
ERBB3-215ENST00000550828 GINS1Q14691 196 aa11.93□□□□□ -0.5
ERBB3-215ENST00000550828 HSPB2Q16082 182 aa11.93□□□□□ -0.5
ERBB3-215ENST00000550828 TMEM201Q5SNT2 666 aa11.93□□□□□ -0.5
ERBB3-215ENST00000550828 TSPO2Q5TGU0 170 aa11.93□□□□□ -0.5
ERBB3-215ENST00000550828 RPL13AP3Q6NVV1 102 aa11.93□□□□□ -0.5
ERBB3-215ENST00000550828 ARIH2OSQ8N7S6 290 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms