RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 APH1AQ96BI3 265 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 CENPNQ96H22 339 aaPredicted RBP11.8□□□□□ -0.52
NUP188-211ENST00000550219 EPYCQ99645 322 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 PKP2Q99959 881 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 TRAF4Q9BUZ4 470 aaPredicted RBP11.8□□□□□ -0.52
NUP188-211ENST00000550219 SLCO5A1Q9H2Y9 848 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 CISD1Q9NZ45 108 aaKnown RBP11.8□□□□□ -0.52
NUP188-211ENST00000550219 GDF2Q9UK05 429 aaPredicted RBP11.8□□□□□ -0.52
NUP188-211ENST00000550219 NSD1Q96L73 2696 aaPredicted RBP11.8□□□□□ -0.52
NUP188-211ENST00000550219 ABCA2Q9BZC7 2435 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 A0A087WUU8 490 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 TRBV4-1A0A0J9YWV2 114 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 TMEM72A0PK05 275 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 SH3PXD2BA1X283 911 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 OR5H1A6NKK0 313 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 ELOA3DA6NLF2 546 aaPredicted RBP11.79□□□□□ -0.52
NUP188-211ENST00000550219 ZNF716A6NP11 495 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 SHISA9B4DS77 424 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 TNFRSF11BO00300 401 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 PMS2P2O95744 297 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 TP53P04637 393 aaPredicted RBP11.79□□□□□ -0.52
NUP188-211ENST00000550219 CXCR1P25024 350 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 CLK1P49759 484 aaKnown RBP11.79□□□□□ -0.52
NUP188-211ENST00000550219 EGR4Q05215 589 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 KRTAP1-1Q07627 177 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 RCN1Q15293 331 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 SEC23BQ15437 767 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 ETFDHQ16134 617 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 ELOA3BQ3SY89 546 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 FBXW9Q5XUX1 488 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 PODNL1Q6PEZ8 512 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 AMIGO2Q86SJ2 522 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 CCDC103Q8IW40 242 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 RNF113BQ8IZP6 322 aaKnown RBP11.79□□□□□ -0.52
NUP188-211ENST00000550219 ZNF433Q8N7K0 673 aaPredicted RBP11.79□□□□□ -0.52
NUP188-211ENST00000550219 ELOA3Q8NG57 546 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 TMEM255BQ8WV15 326 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 ACOT11Q8WXI4 607 aaPredicted RBP11.79□□□□□ -0.52
NUP188-211ENST00000550219 REG4Q9BYZ8 158 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 SLC19A3Q9BZV2 496 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 DCLRE1BQ9H816 532 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 REEP1Q9H902 201 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 FAIMQ9NVQ4 179 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 HDGFL3Q9Y3E1 203 aa11.79□□□□□ -0.52
NUP188-211ENST00000550219 SAMHD1Q9Y3Z3 626 aaKnown RBP11.79□□□□□ -0.52
NUP188-211ENST00000550219 IGKV3D-15A0A087WSY6 115 aa11.78□□□□□ -0.52
NUP188-211ENST00000550219 HTR3EA5X5Y0 456 aa11.78□□□□□ -0.52
NUP188-211ENST00000550219 A8MVM7 634 aa11.78□□□□□ -0.52
NUP188-211ENST00000550219 M0R1B8 84 aa11.78□□□□□ -0.52
NUP188-211ENST00000550219 GNGT2O14610 69 aa11.78□□□□□ -0.52
NUP188-211ENST00000550219 FZD7O75084 574 aa11.78□□□□□ -0.52
NUP188-211ENST00000550219 MRPL33O75394 65 aaKnown RBP11.78□□□□□ -0.52
NUP188-211ENST00000550219 ANPEPP15144 967 aa11.78□□□□□ -0.52
NUP188-211ENST00000550219 UGT2B15P54855 530 aa11.78□□□□□ -0.52
NUP188-211ENST00000550219 SLC22A25Q6T423 547 aa11.78□□□□□ -0.52
NUP188-211ENST00000550219 C5orf46Q6UWT4 87 aa11.78□□□□□ -0.52
NUP188-211ENST00000550219 MBOAT2Q6ZWT7 520 aa11.78□□□□□ -0.52
NUP188-211ENST00000550219 TMEM179BQ7Z7N9 219 aa11.78□□□□□ -0.52
NUP188-211ENST00000550219 OR6S1Q8NH40 331 aa11.78□□□□□ -0.52
NUP188-211ENST00000550219 OR52J3Q8NH60 311 aa11.78□□□□□ -0.52
NUP188-211ENST00000550219 TMEM239Q8WW34 195 aa11.78□□□□□ -0.52
NUP188-211ENST00000550219 NRBF2Q96F24 287 aa11.78□□□□□ -0.52
NUP188-211ENST00000550219 MDFIQ99750 246 aa11.78□□□□□ -0.52
NUP188-211ENST00000550219 ASB6Q9NWX5 421 aa11.78□□□□□ -0.52
NUP188-211ENST00000550219 TAS2R16Q9NYV7 291 aa11.78□□□□□ -0.52
NUP188-211ENST00000550219 STX18Q9P2W9 335 aaKnown RBP11.78□□□□□ -0.52
NUP188-211ENST00000550219 USF3Q68DE3 2245 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 ZC3H12DA2A288 527 aaKnown RBP11.77□□□□□ -0.53
NUP188-211ENST00000550219 ARRDC5A6NEK1 342 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 GPR171O14626 319 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 SSX4O60224 188 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 NUDT6P53370 316 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 FOXG1P55316 489 aaPredicted RBP11.77□□□□□ -0.53
NUP188-211ENST00000550219 LSM11P83369 360 aaKnown RBP eCLIP11.77□□□□□ -0.53
NUP188-211ENST00000550219 PPP1R8Q12972 351 aaKnown RBP11.77□□□□□ -0.53
NUP188-211ENST00000550219 PDK3Q15120 406 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 MICAQ29983 383 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 FGD3Q5JSP0 725 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 AGAP6Q5VW22 663 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 ZNF770Q6IQ21 691 aaPredicted RBP11.77□□□□□ -0.53
NUP188-211ENST00000550219 SHQ1Q6PI26 577 aaKnown RBP11.77□□□□□ -0.53
NUP188-211ENST00000550219 TTC33Q6PID6 262 aaPredicted RBP11.77□□□□□ -0.53
NUP188-211ENST00000550219 TBPL2Q6SJ96 375 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 KLHL17Q6TDP4 642 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 TMEM108Q6UXF1 575 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 ZNF730Q6ZMV8 503 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 P2RY8Q86VZ1 359 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 LINC00471Q8N535 108 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 OR5K1Q8NHB7 308 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 HTRA1Q92743 480 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 DDIT4LQ96D03 193 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 PTDSS2Q9BVG9 487 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 C1QTNF6Q9BXI9 259 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 CACNG6Q9BXT2 260 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 RNPEPL1Q9HAU8 725 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 BARX1Q9HBU1 254 aaPredicted RBP11.77□□□□□ -0.53
NUP188-211ENST00000550219 MEPEQ9NQ76 525 aaPredicted RBP11.77□□□□□ -0.53
NUP188-211ENST00000550219 UPB1Q9UBR1 384 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 TMCC3Q9ULS5 477 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 MED31Q9Y3C7 131 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms