RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 ADAD1Q96M93 576 aaKnown RBP13.28□□□□□ -0.28
CD9-210ENST00000543916 MED18Q9BUE0 208 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 HDHD5Q9BXW7 423 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 OR10A4Q9H209 315 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 YY1AP1Q9H869 796 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 SLC24A3Q9HC58 644 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 TAS2R16Q9NYV7 291 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 NDRG3Q9UGV2 375 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 NPIPB13A6NJU9 1138 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 ZNF726A6NNF4 738 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 NPIPB4C9JG80 1138 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 ZNF587BE7ETH6 402 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 M0R3G1 203 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 RAD51DO75771 328 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 BCL10O95999 233 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 IGHMP01871 453 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 PGA4P0DJD7 388 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 PGA3P0DJD8 388 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 EPXP11678 715 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 PRF1P14222 555 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 MPGP29372 298 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 IFNGR2P38484 337 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 DAP3P51398 398 aaKnown RBP13.27□□□□□ -0.29
CD9-210ENST00000543916 CTXN1P60606 82 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 PRPS1P60891 318 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 ROR2Q01974 943 aaKnown RBP13.27□□□□□ -0.29
CD9-210ENST00000543916 RUNX1T1Q06455 604 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 TOP3AQ13472 1001 aaPredicted RBP13.27□□□□□ -0.29
CD9-210ENST00000543916 KPNB1Q14974 876 aaKnown RBP13.27□□□□□ -0.29
CD9-210ENST00000543916 GABRA6Q16445 453 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 MICAQ29983 383 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 ARMC4Q5T2S8 1044 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 THSD4Q6ZMP0 1018 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 ABHD12BQ7Z5M8 362 aaPredicted RBP13.27□□□□□ -0.29
CD9-210ENST00000543916 GPR137CQ8N3F9 429 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 LINC00471Q8N535 108 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 GNPDA2Q8TDQ7 276 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 ZNF837Q96EG3 531 aaPredicted RBP13.27□□□□□ -0.29
CD9-210ENST00000543916 SLC25A44Q96H78 314 aaPredicted RBP13.27□□□□□ -0.29
CD9-210ENST00000543916 ZC3HAV1LQ96H79 300 aaKnown RBP13.27□□□□□ -0.29
CD9-210ENST00000543916 LRR1Q96L50 414 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 DACH2Q96NX9 599 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 TXNIPQ9H3M7 391 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 GPR35Q9HC97 309 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 ARMC1Q9NVT9 282 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 IL20RAQ9UHF4 553 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 NBPF19A0A087WUL8 3843 aa13.27□□□□□ -0.29
CD9-210ENST00000543916 CENPEQ02224 2701 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 HRNRQ86YZ3 2850 aaPredicted RBP13.26□□□□□ -0.29
CD9-210ENST00000543916 FBN2P35556 2912 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 CIB4A0PJX0 185 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 RPL36A-HNRNPH2H7BZ11 118 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 GNGT2O14610 69 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 NDUFB2O95178 105 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 GASTP01350 101 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 PPP3CBP16298 524 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 CDH2P19022 906 aaPredicted RBP13.26□□□□□ -0.29
CD9-210ENST00000543916 CSNK1A1P48729 337 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 ACTR3P61158 418 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 RPL27P61353 136 aaKnown RBP13.26□□□□□ -0.29
CD9-210ENST00000543916 TSPAN31Q12999 210 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 AQP11Q8NBQ7 271 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 OR6N1Q8NGY5 312 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 ZNF519Q8TB69 540 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 FANK1Q8TC84 345 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 TMEM54Q969K7 222 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 ZNF566Q969W8 418 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 TSPAN32Q96QS1 320 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 KATNB1Q9BVA0 655 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 POLDIP3Q9BY77 421 aaKnown RBP13.26□□□□□ -0.29
CD9-210ENST00000543916 MRPL13Q9BYD1 178 aaKnown RBP13.26□□□□□ -0.29
CD9-210ENST00000543916 NTN4Q9HB63 628 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 CRLF2Q9HC73 371 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 DNAJB9Q9UBS3 223 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 ZNF346Q9UL40 294 aaKnown RBP13.26□□□□□ -0.29
CD9-210ENST00000543916 ADAM18Q9Y3Q7 739 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 AP4S1Q9Y587 144 aa13.26□□□□□ -0.29
CD9-210ENST00000543916 SETXQ7Z333 2677 aaKnown RBP13.26□□□□□ -0.29
CD9-210ENST00000543916 OR5H1A6NKK0 313 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 SIAH2O43255 324 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 TRMUO75648 421 aaKnown RBP13.25□□□□□ -0.29
CD9-210ENST00000543916 ACADSP16219 412 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 RPL4P36578 427 aaKnown RBP13.25□□□□□ -0.29
CD9-210ENST00000543916 ERVK-25P63136 954 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 GK3PQ14409 553 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 TAF11Q15544 211 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 TAB1Q15750 504 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 STK11Q15831 433 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 HIST3H3Q16695 136 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 CEACAM16Q2WEN9 425 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 HMBOX1Q6NT76 420 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 SMARCD3Q6STE5 483 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 SEZ6L2Q6UXD5 910 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 ZNF620Q6ZNG0 422 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 FAM122BQ7Z309 247 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 HS3ST5Q8IZT8 346 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 C1orf162Q8NEQ5 155 aaPredicted RBP13.25□□□□□ -0.29
CD9-210ENST00000543916 NOXO1Q8NFA2 376 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 OR10G2Q8NGC3 310 aa13.25□□□□□ -0.29
CD9-210ENST00000543916 OR1K1Q8NGR3 316 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms