RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 CCR6P51684 374 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 CDH11P55287 796 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 OR4D2P58180 307 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 VSX2P58304 361 aaPredicted RBP5.29□□□□□ -1.56
XRCC4-206ENST00000542685 C1QTNF8P60827 252 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 RAB8AP61006 207 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 RAB10P61026 200 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 ARF6P62330 175 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 PITPNAQ00169 270 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 REEP5Q00765 189 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 TLE4Q04727 773 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 TMEM115Q12893 351 aaPredicted RBP5.29□□□□□ -1.56
XRCC4-206ENST00000542685 IL18Q14116 193 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 CSHL1Q14406 222 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 TRAM1Q15629 374 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 SSX1Q16384 188 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 TECRLQ5HYJ1 363 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 PYY3Q5JQD4 70 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 ATG9BQ674R7 924 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 ZNF660Q6AZW8 331 aaPredicted RBP5.29□□□□□ -1.56
XRCC4-206ENST00000542685 NAPEPLDQ6IQ20 393 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 ALKAL2Q6UX46 152 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 CMC1Q7Z7K0 106 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 LDB1Q86U70 411 aaPredicted RBP5.29□□□□□ -1.56
XRCC4-206ENST00000542685 TMEM200AQ86VY9 491 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 CBLN2Q8IUK8 224 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 MAML2Q8IZL2 1156 aaPredicted RBP5.29□□□□□ -1.56
XRCC4-206ENST00000542685 ZBTB2Q8N680 514 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 SMRP1Q8NCR6 262 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 CCNYQ8ND76 341 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 TMEM104Q8NE00 496 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 PROKR2Q8NFJ6 384 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 OR2T12Q8NG77 320 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 OR9Q2Q8NGE9 314 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 OR5M1Q8NGP8 315 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 OR9A2Q8NGT5 310 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 OR9A4Q8NGU2 314 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 OR13D1Q8NGV5 346 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 OR2G2Q8NGZ5 317 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 OR4Q3Q8NH05 313 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 GNPDA2Q8TDQ7 276 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 SLC35F5Q8WV83 523 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 CNOT9Q92600 299 aaKnown RBP5.29□□□□□ -1.56
XRCC4-206ENST00000542685 NPIPB3Q92617 1050 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 MRPS31Q92665 395 aaKnown RBP5.29□□□□□ -1.56
XRCC4-206ENST00000542685 FAM162AQ96A26 154 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 CMBLQ96DG6 245 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 CMTM7Q96FZ5 175 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 PYURFQ96I23 114 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 ZNF479Q96JC4 524 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 PCYT2Q99447 389 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 UTP23Q9BRU9 249 aaKnown RBP5.29□□□□□ -1.56
XRCC4-206ENST00000542685 C1QTNF6Q9BXI9 259 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 ABCG5Q9H222 651 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 UBQLN3Q9H347 655 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 POMKQ9H5K3 350 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 HHATLQ9HCP6 504 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 EXOSC4Q9NPD3 245 aaKnown RBP5.29□□□□□ -1.56
XRCC4-206ENST00000542685 SNTG1Q9NSN8 517 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 NRBP2Q9NSY0 501 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 TMEM248Q9NWD8 314 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 GRHPRQ9UBQ7 328 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 HACL1Q9UJ83 578 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 SLC25A13Q9UJS0 675 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 FBXL4Q9UKA2 621 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 TSPAN16Q9UKR8 245 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 FZD10Q9ULW2 581 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 POFUT2Q9Y2G5 429 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 LSM2Q9Y333 95 aaKnown RBP5.29□□□□□ -1.56
XRCC4-206ENST00000542685 UBE2J1Q9Y385 318 aaPredicted RBP5.29□□□□□ -1.56
XRCC4-206ENST00000542685 V9GYS6 101 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 A8MWP6 167 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 K7EP13 123 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 SYT5O00445 386 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 CXCR6O00574 342 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 CTDSPLO15194 276 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 MFSD11O43934 449 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 CDRT1O95170 752 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 SIX3O95343 332 aaPredicted RBP5.28□□□□□ -1.56
XRCC4-206ENST00000542685 WISP3O95389 354 aaPredicted RBP5.28□□□□□ -1.56
XRCC4-206ENST00000542685 CXCL14O95715 111 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 TFP02787 698 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 WNT1P04628 370 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 ALDOBP05062 364 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 NGFRP08138 427 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 ITGA5P08648 1049 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 CD3GP09693 182 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 NCK1P16333 377 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 ZNF25P17030 456 aaPredicted RBP5.28□□□□□ -1.56
XRCC4-206ENST00000542685 CXCL3P19876 107 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 AHCYP23526 432 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 PSMB4P28070 264 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 TEAD1P28347 426 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 AHRP35869 848 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 NNMTP40261 264 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 CSNK1DP48730 415 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 TAF6P49848 677 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 DAPP51397 102 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 POLR2JP52435 117 aaKnown RBP5.28□□□□□ -1.56
XRCC4-206ENST00000542685 PGGT1BP53609 377 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms