RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 ZNF426Q9BUY5 554 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 KIR3DX1Q9H7L2 352 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 PTTG3PQ9NZH4 202 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 SERTAD3Q9UJW9 196 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 SLC22A13Q9Y226 551 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 RNF215Q9Y6U7 377 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 A0A0A6YYC8 382 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 PRR19A6NJB7 356 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 I3L1I5 382 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 CTDSPLO15194 276 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 RP2O75695 350 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 AGR2O95994 175 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 ANXA2P07355 339 aaKnown RBP9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 SMIM10L1P0DMW3 83 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 GLULP15104 373 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 CENPAP49450 140 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 RAG2P55895 527 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 ZNF273Q14593 569 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 ZNF660Q6AZW8 331 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 UNQ9370/PRO34162Q6UXP9 181 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 IQCF2Q8IXL9 164 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 SYS1Q8N2H4 156 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 HAVCR1Q96D42 359 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 SMIM10Q96HG1 83 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 SEC22AQ96IW7 307 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 ZNF75AQ96N20 296 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 SHARPINQ9H0F6 387 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 LMAN2LQ9H0V9 348 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 RXFP3Q9NSD7 469 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 ACTR10Q9NZ32 417 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 IGKV1D-42A0A075B6H8 117 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 SOX1O00570 391 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 UPK3AO75631 287 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 ITGA5P08648 1049 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 GIPP09681 153 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 GABRA1P14867 456 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 MAOAP21397 527 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 MST1P26927 711 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 HTRA4P83105 476 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 DEFA5Q01523 94 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 C1QL3Q5VWW1 255 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 RPL13AP3Q6NVV1 102 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 LRRN1Q6UXK5 716 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 OR6V1Q8N148 313 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 FAM71CQ8NEG0 241 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 OR5AK2Q8NH90 309 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 NARS2Q96I59 477 aaKnown RBP9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 TOX2Q96NM4 488 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 C7orf50Q9BRJ6 194 aaKnown RBP9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 RSPH9Q9H1X1 276 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 MRTO4Q9UKD2 239 aaKnown RBP9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 DOCK8Q8NF50 2099 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 CSTAP01040 98 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 HIST1H2ABP04908 130 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 CD226Q15762 336 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 GSG1LQ6UXU4 331 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 HIST3H2AQ7L7L0 130 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 SLC36A1Q7Z2H8 476 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 DENND4AQ7Z401 1863 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 LRRTM1Q86UE6 522 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 PRR22Q8IZ63 422 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 CA13Q8N1Q1 262 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 ZNF676Q8N7Q3 588 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 HIST1H2ACQ93077 130 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 TM4SF19Q96DZ7 209 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 IGFLR1Q9H665 355 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 PLEKHA1Q9HB21 404 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 MKKSQ9NPJ1 570 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 COLEC10Q9Y6Z7 277 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 C11orf98E9PRG8 122 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 TOR1AO14656 332 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 ALOX12BO75342 701 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 GLSO94925 669 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 FGF19O95750 216 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 PPP3CBP16298 524 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 COL9A1P20849 921 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 CTXN1P60606 82 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 POU4F2Q12837 409 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 RUNX3Q13761 415 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 FAM109BQ6ICB4 259 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 PRSS35Q8N3Z0 413 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 ZNF321PQ8N8H1 164 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 POMGNT2Q8NAT1 580 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 OR2AK2Q8NG84 335 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 MIB2Q96AX9 1013 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 LCORQ96JN0 433 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 PBX4Q9BYU1 374 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 TINAGL1Q9GZM7 467 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 SYT4Q9H2B2 425 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 SYNDIG1Q9H7V2 258 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 KIF25Q9UIL4 384 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 KCNG2Q9UJ96 466 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 ZNF337Q9Y3M9 751 aa9.42□□□□□ -0.9
CDC42SE1-207ENST00000540998 ACOT7O00154 380 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 OR2A4O95047 310 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 CCKBRP32239 447 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 MAP3K8P41279 467 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 POU3F4P49335 361 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 RAP2BP61225 183 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 RPS21P63220 83 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms