RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 CT45A8P0DMV1 189 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 CT45A9P0DMV2 189 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 CSRP1P21291 193 aaKnown RBP11.19□□□□□ -0.62
NPC1-202ENST00000540608 S100A11P31949 105 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 LTBQ06643 244 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 CT45A2Q5DJT8 189 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 B3GNTL1Q67FW5 361 aaPredicted RBP11.19□□□□□ -0.62
NPC1-202ENST00000540608 TMPRSS12Q86WS5 348 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 SFTPA2Q8IWL1 248 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 LRRC75AQ8NAA5 344 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 LIPHQ8WWY8 451 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 SIPA1Q96FS4 1042 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 CCNL2Q96S94 520 aaPredicted RBP11.19□□□□□ -0.62
NPC1-202ENST00000540608 MTFP1Q9UDX5 166 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 HIF3AQ9Y2N7 669 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 SLC6A5Q9Y345 797 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 TRBV5-7A0A0A0MS05 114 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 UBE2QL1A1L167 161 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 FAM221BA6H8Z2 402 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 HCRTR1O43613 425 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 B3GALNT1O75752 331 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 CALCRP30988 508 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 RBMS2Q15434 407 aaKnown RBP11.18□□□□□ -0.62
NPC1-202ENST00000540608 CDC20BQ86Y33 519 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 BCORP1Q8N888 145 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 OR52B4Q8NGK2 314 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 TAS2R8Q9NYW2 309 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 CPNE7Q9UBL6 633 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 ARHGEF17Q96PE2 2063 aaPredicted RBP11.18□□□□□ -0.62
NPC1-202ENST00000540608 ANXA2P2A6NMY6 339 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 TGFBR3LH3BV60 316 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 ANXA2P07355 339 aaKnown RBP11.18□□□□□ -0.62
NPC1-202ENST00000540608 NMBP08949 121 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 PTGS2P35354 604 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 MAP2K6P52564 334 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 ZNF74Q16587 644 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 ALG11Q2TAA5 492 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 PCGF3Q3KNV8 242 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 SFRP5Q5T4F7 317 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 TMUB2Q71RG4 321 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 ZNF227Q86WZ6 799 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 ZNF440Q8IYI8 595 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 SDR16C5Q8N3Y7 309 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 ZNF417Q8TAU3 575 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 KLHL15Q96M94 604 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 OR1F2PQ96R84 312 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 FBRSQ9HAH7 460 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 STEAP1Q9UHE8 339 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 OPN4Q9UHM6 478 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 SCML1Q9UN30 329 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 FANCMQ8IYD8 2048 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 A0A0C4DFX4 3053 aa11.18□□□□□ -0.62
NPC1-202ENST00000540608 TRAV8-7A0A075B6U6 113 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 ELOA3DA6NLF2 546 aaPredicted RBP11.17□□□□□ -0.62
NPC1-202ENST00000540608 OR4C45A6NMZ5 311 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 PRAMEF2O60811 474 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 TXNDC12O95881 172 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 MAS1P04201 325 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 CSF1P09603 554 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 PNMTP11086 282 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 POU3F2P20265 443 aaPredicted RBP11.17□□□□□ -0.62
NPC1-202ENST00000540608 SDHAP31040 664 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 PGDP52209 483 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 CTXN1P60606 82 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 PLA2G7Q13093 441 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 SRSF5Q13243 272 aaKnown RBP11.17□□□□□ -0.62
NPC1-202ENST00000540608 ELOA3BQ3SY89 546 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 KLHL26Q53HC5 615 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 ALG10Q5BKT4 473 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 MAMSTRQ6ZN01 415 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 ARHGEF39Q8N4T4 335 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 ELOA3Q8NG57 546 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 SCARB1Q8WTV0 552 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 ZDHHC1Q8WTX9 485 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 LINC00052Q96N35 136 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 GINS4Q9BRT9 223 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 SRA1Q9HD15 236 aaKnown RBP11.17□□□□□ -0.62
NPC1-202ENST00000540608 EML5Q05BV3 1969 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 TP53BP1Q12888 1972 aaPredicted RBP11.17□□□□□ -0.62
NPC1-202ENST00000540608 A0A1B0GTH9 108 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 ZNF254O75437 659 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 RP2O75695 350 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 CTSBP07858 339 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 H2BFSP57053 126 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 NNATQ16517 81 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 WBP2NLQ6ICG8 309 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 ANKRD16Q6P6B7 361 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 C10orf53Q8N6V4 93 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 LSM14AQ8ND56 463 aaKnown RBP11.17□□□□□ -0.62
NPC1-202ENST00000540608 OR4C16Q8NGL9 310 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 OR2G2Q8NGZ5 317 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 LHFPL5Q8TAF8 219 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 SEMA4CQ9C0C4 833 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 FAM60AQ9NP50 221 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 LAMP5Q9UJQ1 280 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 OR10H1Q9Y4A9 318 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 SESN1Q9Y6P5 492 aa11.17□□□□□ -0.62
NPC1-202ENST00000540608 ARPC5O15511 151 aa11.16□□□□□ -0.62
NPC1-202ENST00000540608 PPP3CBP16298 524 aa11.16□□□□□ -0.62
NPC1-202ENST00000540608 HNRNPA2B1P22626 353 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms