RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 PACSIN2Q9UNF0 486 aaPredicted RBP4.31□□□□□ -1.72
TRAV11-201ENST00000539512 TP53TG5Q9Y2B4 290 aa4.31□□□□□ -1.72
TRAV11-201ENST00000539512 EIF4G1Q04637 1599 aaKnown RBP4.31□□□□□ -1.72
TRAV11-201ENST00000539512 KIR2DL5BA0A0G2JN68 375 aa4.3□□□□□ -1.72
TRAV11-201ENST00000539512 KIR2DL5BA0A0G2JPC4 375 aa4.3□□□□□ -1.72
TRAV11-201ENST00000539512 A0A1W2PNU3 283 aaPredicted RBP4.3□□□□□ -1.72
TRAV11-201ENST00000539512 CCL21O00585 134 aa4.3□□□□□ -1.72
TRAV11-201ENST00000539512 SLC2A3P11169 496 aa4.3□□□□□ -1.72
TRAV11-201ENST00000539512 GPR6P46095 362 aaPredicted RBP4.3□□□□□ -1.72
TRAV11-201ENST00000539512 SUCLG1P53597 346 aaKnown RBP4.3□□□□□ -1.72
TRAV11-201ENST00000539512 PRAMEF5Q5TYX0 476 aa4.3□□□□□ -1.72
TRAV11-201ENST00000539512 PRAMEF6Q5VXH4 476 aa4.3□□□□□ -1.72
TRAV11-201ENST00000539512 LINC01551Q86U37 167 aa4.3□□□□□ -1.72
TRAV11-201ENST00000539512 KIR2DL5AQ8N109 375 aa4.3□□□□□ -1.72
TRAV11-201ENST00000539512 ZADH2Q8N4Q0 377 aa4.3□□□□□ -1.72
TRAV11-201ENST00000539512 DUSP18Q8NEJ0 188 aa4.3□□□□□ -1.72
TRAV11-201ENST00000539512 KIR2DL5BQ8NHK3 375 aa4.3□□□□□ -1.72
TRAV11-201ENST00000539512 MARCH1Q8TCQ1 289 aa4.3□□□□□ -1.72
TRAV11-201ENST00000539512 IL22RA2Q969J5 263 aa4.3□□□□□ -1.72
TRAV11-201ENST00000539512 TMEM59Q9BXS4 323 aa4.3□□□□□ -1.72
TRAV11-201ENST00000539512 XCL2Q9UBD3 114 aa4.3□□□□□ -1.72
TRAV11-201ENST00000539512 RAB26Q9ULW5 256 aa4.3□□□□□ -1.72
TRAV11-201ENST00000539512 IGLV3-22A0A075B6J6 115 aa4.29□□□□□ -1.72
TRAV11-201ENST00000539512 PRSS37A4D1T9 235 aa4.29□□□□□ -1.72
TRAV11-201ENST00000539512 FOXE1O00358 373 aaPredicted RBP4.29□□□□□ -1.72
TRAV11-201ENST00000539512 GOSR2O14653 212 aa4.29□□□□□ -1.72
TRAV11-201ENST00000539512 CALM1P0DP23 149 aa4.29□□□□□ -1.72
TRAV11-201ENST00000539512 CALM2P0DP24 149 aa4.29□□□□□ -1.72
TRAV11-201ENST00000539512 CALM3P0DP25 149 aa4.29□□□□□ -1.72
TRAV11-201ENST00000539512 CASP14P31944 242 aa4.29□□□□□ -1.72
TRAV11-201ENST00000539512 LONP1P36776 959 aaKnown RBP4.29□□□□□ -1.72
TRAV11-201ENST00000539512 CCR6P51684 374 aa4.29□□□□□ -1.72
TRAV11-201ENST00000539512 ACTR3P61158 418 aa4.29□□□□□ -1.72
TRAV11-201ENST00000539512 KCNJ2P63252 427 aa4.29□□□□□ -1.72
TRAV11-201ENST00000539512 PPP1R7Q15435 360 aa4.29□□□□□ -1.72
TRAV11-201ENST00000539512 ZNF77Q15935 545 aa4.29□□□□□ -1.72
TRAV11-201ENST00000539512 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
TRAV11-201ENST00000539512 ZNF557Q8N988 423 aaPredicted RBP4.29□□□□□ -1.72
TRAV11-201ENST00000539512 SGK3Q96BR1 496 aa4.29□□□□□ -1.72
TRAV11-201ENST00000539512 MED8Q96G25 268 aa4.29□□□□□ -1.72
TRAV11-201ENST00000539512 OSBPL10Q9BXB5 764 aa4.29□□□□□ -1.72
TRAV11-201ENST00000539512 GPR61Q9BZJ8 451 aa4.29□□□□□ -1.72
TRAV11-201ENST00000539512 MYOZ2Q9NPC6 264 aa4.29□□□□□ -1.72
TRAV11-201ENST00000539512 CTPS2Q9NRF8 586 aa4.29□□□□□ -1.72
TRAV11-201ENST00000539512 KLHL28Q9NXS3 571 aa4.29□□□□□ -1.72
TRAV11-201ENST00000539512 SLC7A8Q9UHI5 535 aa4.29□□□□□ -1.72
TRAV11-201ENST00000539512 PRG3Q9Y2Y8 225 aaPredicted RBP4.29□□□□□ -1.72
TRAV11-201ENST00000539512 CCDC180Q9P1Z9 1646 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 TDRD6O60522 2096 aaKnown RBP4.28□□□□□ -1.72
TRAV11-201ENST00000539512 MAP3K15Q6ZN16 1313 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 MEGF6O75095 1541 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 A0A0B4J2A0 478 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 IGHV3-64DA0A0J9YX35 117 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 SUPT3HO75486 399 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 IGKV3-11P04433 115 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 SERPIND1P05546 499 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 HOXA9P31269 272 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 VHLP40337 213 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 UBE2AP49459 152 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 SGCAQ16586 387 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 TSPO2Q5TGU0 170 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 PUSL1Q8N0Z8 303 aaKnown RBP4.28□□□□□ -1.72
TRAV11-201ENST00000539512 OR4F6Q8NGB9 312 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 NT5C3BQ969T7 300 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 DNAJC19Q96DA6 116 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 ASB9Q96DX5 294 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 TPD52L3Q96J77 140 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 C12orf42Q96LP6 360 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 SH3GL1Q99961 368 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 RARRES2Q99969 163 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 FAIM2Q9BWQ8 316 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 SLC2A8Q9NY64 477 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 SHPKQ9UHJ6 478 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 HPCAL4Q9UM19 191 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 ASB3Q9Y575 518 aa4.28□□□□□ -1.72
TRAV11-201ENST00000539512 MSH6P52701 1360 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 CDHR2Q9BYE9 1310 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 A0A0U1RQS6 177 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 DLGAP1O14490 977 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 PPP1R2P9O14990 202 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 PALMO75781 387 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 TMEM50AO95807 157 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 NDUFB10O96000 172 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 GAPDHP04406 335 aaKnown RBP4.27□□□□□ -1.73
TRAV11-201ENST00000539512 CXCL5P42830 114 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 CRYBB2P43320 205 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 NPBWR2P48146 333 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 MNAT1P51948 309 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 FBXW4P57775 412 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 REG3AQ06141 175 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 AQP6Q13520 282 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 FZD2Q14332 565 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 GK3PQ14409 553 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 TMEM183BQ1AE95 376 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 Q6P435 159 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 C19orf35Q6ZS72 473 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 FAM43BQ6ZT52 329 aaPredicted RBP4.27□□□□□ -1.73
TRAV11-201ENST00000539512 TMEM183AQ8IXX5 376 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 CEP112Q8N8E3 955 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 SDR9C7Q8NEX9 313 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms