RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 RPL36Q9Y3U8 105 aaKnown RBP9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 SNX5Q9Y5X3 404 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 A0A1B0GVC2 190 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 A0A1W2PNV4 684 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 IRGMA1A4Y4 181 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SH3D21A4FU49 640 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 MAGEA13PA6NCF6 341 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 FAM183AA6NL82 134 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 FIGNL2A6NMB9 653 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CLCA1A8K7I4 914 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 BHLHE40O14503 412 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 PRKYO43930 277 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SLC43A1O75387 559 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 MRPL33O75394 65 aaKnown RBP9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 TNFAIP8O95379 198 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 IGHG1P01857 330 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 HLA-DOBP13765 273 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 GABRA1P14867 456 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CDH11P55287 796 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ISL1P61371 349 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CAMK2DQ13557 499 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 RNPS1Q15287 305 aaKnown RBP9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ZNF239Q16600 458 aaKnown RBP9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 KLHL22Q53GT1 634 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 NIPAL3Q6P499 406 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 USP51Q70EK9 711 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ADCK1Q86TW2 530 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ZNF100Q8IYN0 542 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SYT14Q8NB59 555 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SLC37A3Q8NCC5 494 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 PROKR2Q8NFJ6 384 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 OR6K6Q8NGW6 343 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 OR2T4Q8NH00 348 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 RHOXF1Q8NHV9 184 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 HDAC2Q92769 488 aaKnown RBP9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ZNF566Q969W8 418 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 TXNDC15Q96J42 360 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ADAD1Q96M93 576 aaKnown RBP9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 GPX7Q96SL4 187 aaPredicted RBP9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 TUBA1CQ9BQE3 449 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 EMC6Q9BV81 110 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 FN3KQ9H479 309 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CALHM2Q9HA72 323 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 RPRD1BQ9NQG5 326 aaKnown RBP9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ASB6Q9NWX5 421 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 MED29Q9NX70 200 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ZNF226Q9NYT6 803 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 UPB1Q9UBR1 384 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 AASSQ9UDR5 926 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CHD6Q8TD26 2715 aa9.52□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CFAP47Q6ZTR5 3102 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SLC35F4A4IF30 521 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 EFCAB10A6NFE3 127 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 H7C1C5 153 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SMAD9O15198 467 aaKnown RBP9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SLC16A7O60669 478 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CYTIPO60759 359 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ENTPD6O75354 484 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SLC2A10O95528 541 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CRABP1P29762 137 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CSNK1A1P48729 337 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 NUDT6P53370 316 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 FXYD6P3P58550 94 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 LCN6P62502 163 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 NFATC3Q12968 1075 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 APOFQ13790 326 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CRMP1Q14194 572 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 OCLNQ16625 522 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CTU2Q2VPK5 515 aaKnown RBP9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 OR2A2Q6IF42 318 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CREB3L2Q70SY1 520 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SIAH3Q8IW03 269 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 UBE2J2Q8N2K1 259 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 GPR137CQ8N3F9 429 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 FAM26EQ8N5C1 309 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 LRRC75AQ8NAA5 344 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 OR10H5Q8NGA6 315 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 OR9Q1Q8NGQ5 310 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 FNDC9Q8TBE3 224 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 FNDC8Q8TC99 324 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ZPLD1Q8TCW7 415 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SNRNP40Q96DI7 357 aaKnown RBP9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ADGRG7Q96K78 797 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ZNF582Q96NG8 517 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 MED20Q9H944 212 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 VCX3AQ9NNX9 186 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 AMBNQ9NP70 447 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ASF1BQ9NVP2 202 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CLEC4AQ9UMR7 237 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ZNF175Q9Y473 711 aa9.51□□□□□ -0.89
TNFRSF1A-211ENST00000538363 DMXL2Q8TDJ6 3036 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 LOC102725191A0A1B0GVB3 256 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 PRSS37A4D1T9 235 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SLC22A31A6NKX4 558 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ZNHIT1O43257 154 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 PRODHO43272 600 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 WDR1O75083 606 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 KHDRBS3O75525 346 aaKnown RBP9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 TRMUO75648 421 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms