RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 IL17RDQ8NFM7 739 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 GRPEL2Q8TAA5 225 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 ZNF519Q8TB69 540 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 ZPLD1Q8TCW7 415 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 MRGPRX4Q96LA9 322 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 WDR77Q9BQA1 342 aaPredicted RBP12.28□□□□□ -0.44
SMG6-203ENST00000536871 NEK6Q9HC98 313 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 ACOXLQ9NUZ1 547 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 MYOTQ9UBF9 498 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 EXTL2Q9UBQ6 330 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 COPS3Q9UNS2 423 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 PRELID1Q9Y255 219 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 LOC102723996A0A087X1L8 192 aa12.27□□□□□ -0.44
SMG6-203ENST00000536871 C9J4A7 227 aa12.27□□□□□ -0.44
SMG6-203ENST00000536871 PLPP3O14495 311 aa12.27□□□□□ -0.44
SMG6-203ENST00000536871 ARHGEF9O43307 516 aa12.27□□□□□ -0.44
SMG6-203ENST00000536871 NCR1O76036 304 aa12.27□□□□□ -0.44
SMG6-203ENST00000536871 TIAF1O95411 115 aa12.27□□□□□ -0.44
SMG6-203ENST00000536871 GP1BAP07359 652 aa12.27□□□□□ -0.44
SMG6-203ENST00000536871 GRPRP30550 384 aa12.27□□□□□ -0.44
SMG6-203ENST00000536871 INSL4Q14641 139 aa12.27□□□□□ -0.44
SMG6-203ENST00000536871 RPTNQ6XPR3 784 aa12.27□□□□□ -0.44
SMG6-203ENST00000536871 SHISA6Q6ZSJ9 500 aa12.27□□□□□ -0.44
SMG6-203ENST00000536871 ENKURQ8TC29 256 aa12.27□□□□□ -0.44
SMG6-203ENST00000536871 SUN5Q8TC36 379 aa12.27□□□□□ -0.44
SMG6-203ENST00000536871 ADAMTS14Q8WXS8 1223 aa12.27□□□□□ -0.44
SMG6-203ENST00000536871 COMMD4Q9H0A8 199 aa12.27□□□□□ -0.44
SMG6-203ENST00000536871 SRA1Q9HD15 236 aaKnown RBP12.27□□□□□ -0.44
SMG6-203ENST00000536871 FANCFQ9NPI8 374 aa12.27□□□□□ -0.44
SMG6-203ENST00000536871 SERINC1Q9NRX5 453 aa12.27□□□□□ -0.44
SMG6-203ENST00000536871 RASD1Q9Y272 281 aa12.27□□□□□ -0.44
SMG6-203ENST00000536871 SPTBP11277 2137 aa12.27□□□□□ -0.44
SMG6-203ENST00000536871 IGHV3-20A0A0C4DH32 117 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 A0A0G2JK05 382 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.27□□□□□ -0.45
SMG6-203ENST00000536871 SMIM30A4D0T7 59 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 TMEM212A6NML5 194 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 TP53I11O14683 189 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 FZD7O75084 574 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 FBXO45P0C2W1 286 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 ALOX5APP20292 161 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 RCVRNP35243 200 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 THBS2P35442 1172 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 MAP2K3P46734 347 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 PITPNBP48739 271 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 ZNF41P51814 821 aaPredicted RBP12.27□□□□□ -0.45
SMG6-203ENST00000536871 SCAND1P57086 179 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 SNTA1Q13424 505 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 ALKBH1Q13686 389 aaKnown RBP12.27□□□□□ -0.45
SMG6-203ENST00000536871 EXT1Q16394 746 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 ACKR1Q16570 336 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 FDX2Q6P4F2 183 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 TMEM81Q6P7N7 255 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 UBQLNLQ8IYU4 475 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 RDH10Q8IZV5 341 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 OR6V1Q8N148 313 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 YIPF7Q8N8F6 280 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 MAFAQ8NHW3 353 aaPredicted RBP12.27□□□□□ -0.45
SMG6-203ENST00000536871 TRMT10AQ8TBZ6 339 aaKnown RBP12.27□□□□□ -0.45
SMG6-203ENST00000536871 CAPSLQ8WWF8 208 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 SLC25A36Q96CQ1 311 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 NXPE2Q96DL1 559 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 SYT4Q9H2B2 425 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 RBFOX1Q9NWB1 397 aaKnown RBP12.27□□□□□ -0.45
SMG6-203ENST00000536871 AKAP7Q9P0M2 348 aaPredicted RBP12.27□□□□□ -0.45
SMG6-203ENST00000536871 PPP4R1LQ9P1A2 415 aa12.27□□□□□ -0.45
SMG6-203ENST00000536871 RBMX2Q9Y388 322 aaKnown RBP12.27□□□□□ -0.45
SMG6-203ENST00000536871 FTCDNL1E5RQL4 147 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 ADAM10O14672 748 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 TPPPO94811 219 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 IGHEP01854 428 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 ZNF883P0CG24 379 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 EPXP11678 715 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 SPNP16150 400 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 ELK1P19419 428 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 AHCYP23526 432 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 RFX2P48378 723 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 HCCSP53701 268 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 FBXW4P57775 412 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 RPS11P62280 158 aaKnown RBP eCLIP12.26□□□□□ -0.45
SMG6-203ENST00000536871 MC2RQ01718 297 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 ZFP36L1Q07352 338 aaKnown RBP12.26□□□□□ -0.45
SMG6-203ENST00000536871 NTRK2Q16620 822 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 Q499Y3 187 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 KCTD18Q6PI47 426 aaPredicted RBP12.26□□□□□ -0.45
SMG6-203ENST00000536871 HDDC2Q7Z4H3 204 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 SAMD12Q8N8I0 201 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 ZNF511Q8NB15 262 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 ADPRHL1Q8NDY3 354 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 DUSP18Q8NEJ0 188 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 OR5AK2Q8NH90 309 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 OTOSQ8NHW6 89 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 C15orf40Q8WUR7 153 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 ZNRF4Q8WWF5 429 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 ZNF524Q96C55 264 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 DEFB126Q9BYW3 111 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 TP63Q9H3D4 680 aaPredicted RBP12.26□□□□□ -0.45
SMG6-203ENST00000536871 KLRF1Q9NZS2 232 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 SPATA2Q9UM82 520 aa12.26□□□□□ -0.45
SMG6-203ENST00000536871 B9D1Q9UPM9 204 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms