RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 TMEM30AQ9NV96 361 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 CNIH4Q9P003 139 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 HSF4Q9ULV5 492 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 GAB2Q9UQC2 676 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 MGAT4DA6NG13 374 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 OR5H14A6NHG9 310 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 A8MXE2 369 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 SAP18O00422 153 aaKnown RBP3.4□□□□□ -1.86
MCF2-210ENST00000536274 MANBAO00462 879 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 TGOLN2O43493 480 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 FRS3O43559 492 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 SLC28A2O43868 658 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 RAMP1O60894 148 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 SC5DO75845 299 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 CLUP10909 449 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 IRF2P14316 349 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 MYOGP15173 224 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 RPA2P15927 270 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 LAG3P18627 525 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 FUT1P19526 365 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 ARL2P36404 184 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 RPL4P36578 427 aaKnown RBP3.4□□□□□ -1.86
MCF2-210ENST00000536274 GLP1RP43220 463 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 PGFP49763 221 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 MMP15P51511 669 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 SLC16A1P53985 500 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 RAB4BP61018 213 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 RGNQ15493 299 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 KCNMB1Q16558 191 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 TM4SF20Q53R12 229 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 ZNF770Q6IQ21 691 aaPredicted RBP3.4□□□□□ -1.86
MCF2-210ENST00000536274 SLC25A24Q6NUK1 477 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 TEX38Q6PEX7 206 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 CD200R1LQ6Q8B3 271 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 KIRREL2Q6UWL6 708 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 KCTD9Q7L273 389 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 FCRLAQ7L513 359 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 GRASPQ7Z6J2 395 aaPredicted RBP3.4□□□□□ -1.86
MCF2-210ENST00000536274 SERPINA11Q86U17 422 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 IQCHQ86VS3 1027 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 SYT12Q8IV01 421 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 ARHGAP12Q8IWW6 846 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 CMTM1Q8IZ96 169 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 FAM98AQ8NCA5 519 aaKnown RBP3.4□□□□□ -1.86
MCF2-210ENST00000536274 HJURPQ8NCD3 748 aaPredicted RBP3.4□□□□□ -1.86
MCF2-210ENST00000536274 OR52N2Q8NGI0 321 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 SLC7A13Q8TCU3 470 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 METTL21AQ8WXB1 218 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 RAB8BQ92930 207 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 LCORQ96JN0 433 aaPredicted RBP3.4□□□□□ -1.86
MCF2-210ENST00000536274 SNX22Q96L94 193 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 PDCD2LQ9BRP1 358 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 ULBP1Q9BZM6 244 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 SMG9Q9H0W8 520 aaKnown RBP3.4□□□□□ -1.86
MCF2-210ENST00000536274 FN3KQ9H479 309 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 TRPV4Q9HBA0 871 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 DNAJC4Q9NNZ3 241 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 SPHK2Q9NRA0 654 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 TAS2R5Q9NYW4 299 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 PRODH2Q9UF12 536 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 SCML2Q9UQR0 700 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 TIMM13Q9Y5L4 95 aaPredicted RBP3.4□□□□□ -1.86
MCF2-210ENST00000536274 PUS1Q9Y606 427 aaKnown RBP eCLIP3.4□□□□□ -1.86
MCF2-210ENST00000536274 SLCO1B1Q9Y6L6 691 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 FNDC1Q4ZHG4 1894 aaPredicted RBP3.4□□□□□ -1.87
MCF2-210ENST00000536274 A0A087WZY1 265 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 TMEM238LA0A1B0GVL6 79 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.4□□□□□ -1.87
MCF2-210ENST00000536274 OR5H15A6NDH6 313 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 MSGN1A6NI15 193 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 ACOD1A6NK06 481 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 OR5H1A6NKK0 313 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 M0R3H8 397 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 BCAT2O15382 392 aaPredicted RBP3.4□□□□□ -1.87
MCF2-210ENST00000536274 BCL2L11O43521 198 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 SCN2BO60939 215 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 ARIH2O95376 493 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 SBK2P0C263 348 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 OR4E1P0C645 316 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 JMJD7P0C870 316 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 GZMBP10144 247 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 GPX2P18283 190 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 IL1RNP18510 177 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 NDUFS1P28331 727 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 CASRP41180 1078 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 XCR1P46094 333 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 PXNP49023 591 aaPredicted RBP3.4□□□□□ -1.87
MCF2-210ENST00000536274 MTNR1BP49286 362 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 TTPAP49638 278 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 FHITP49789 147 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 SNRPGP62308 76 aaKnown RBP3.4□□□□□ -1.87
MCF2-210ENST00000536274 RELBQ01201 579 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 RING1Q06587 406 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 SCARB2Q14108 478 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 CEBPEQ15744 281 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 PNLIPRP3Q17RR3 467 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 CTSL3PQ5NE16 218 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 CDCP2Q5VXM1 449 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 GGNBP1Q5YKI7 109 aa3.4□□□□□ -1.87
MCF2-210ENST00000536274 C12orf73Q69YU5 71 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms