RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 PLPP3O14495 311 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 UBDO15205 165 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 TPST2O60704 377 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 ICMTO60725 284 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 UBL3O95164 117 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 IGF2P01344 180 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 MSMBP08118 114 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 NUDT7P0C024 238 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 ITGA2P17301 1181 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 GTF2E2P29084 291 aaKnown RBP9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 PCBP3P57721 371 aaKnown RBP9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 HILS1P60008 231 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 TUBA1BP68363 451 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 TUBA4AP68366 448 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 C1DQ13901 141 aaKnown RBP9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 PCGF3Q3KNV8 242 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 RPS26P11Q5JNZ5 115 aaPredicted RBP9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 ATG16L1Q676U5 607 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 ZNF613Q6PF04 617 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 BLOC1S3Q6QNY0 202 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 IL17RELQ6ZVW7 336 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 TUBA1AQ71U36 451 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 GLCCI1Q86VQ1 547 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 COMTD1Q86VU5 262 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 ZNF584Q8IVC4 421 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 UEVLDQ8IX04 471 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 MSRB3Q8IXL7 192 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 MIER2Q8N344 545 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 OR6X1Q8NH79 312 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 TMEM54Q969K7 222 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 SLC25A36Q96CQ1 311 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 ZMYND19Q96E35 227 aaPredicted RBP9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 SNX18Q96RF0 628 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 ZNF416Q9BWM5 594 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 SLC19A3Q9BZV2 496 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 PCDHAC1Q9H158 963 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 C1orf198Q9H425 327 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 CACYBPQ9HB71 228 aaKnown RBP9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 B3GAT2Q9NPZ5 323 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 SLC7A8Q9UHI5 535 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 PPIAL4EA0A075B759 164 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 PPIAL4CA0A0B4J2A2 164 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 PPIAL4DF5H284 164 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 ANP32DO95626 131 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 HLA-HP01893 362 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 HPXP02790 462 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 ADH4P08319 380 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 PPIAL4FP0DN26 164 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 HLA-DOBP13765 273 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 ANPEPP15144 967 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 CFPP27918 469 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 NME5P56597 212 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 RAB1AP62820 205 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 TRIP10Q15642 601 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 TRMT5Q32P41 509 aaKnown RBP9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 GTDC1Q4AE62 458 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 VHLLQ6RSH7 139 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 EPGNQ6UW88 154 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 KRT73Q86Y46 540 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 FUNDC1Q8IVP5 155 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 C1orf174Q8IYL3 243 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 CLDND2Q8NHS1 167 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 SGMS2Q8NHU3 365 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 MAL2Q969L2 176 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 FOXB1Q99853 325 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 DYNLRB1Q9NP97 96 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 G6PC2Q9NQR9 355 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 FAM53CQ9NYF3 392 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 CORO2BQ9UQ03 480 aa9.61□□□□□ -0.87
CLSTN3-206ENST00000535668 TMEM120BA0PK00 339 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 NPIPB13A6NJU9 1138 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 FAM157AC9JC47 383 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 NPIPB4C9JG80 1138 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 J3QLI3 93 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 HAX1O00165 279 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 TPST1O60507 370 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 DEAF1O75398 565 aaPredicted RBP9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 SERPINB7O75635 380 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 MFN2O95140 757 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 VENTXO95231 258 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 FSHBP01225 129 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 TSPAN19P0C672 248 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 GAAP10253 952 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 GATA3P23771 443 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 COL8A2P25067 703 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 CRYBB2P43320 205 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 GPR6P46095 362 aaPredicted RBP9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 LIMS1P48059 325 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 HOXC5Q00444 222 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 CDK6Q00534 326 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 IL1RL1Q01638 556 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 RBBP4Q09028 425 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 OR1Q1Q15612 314 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 CARTPTQ16568 116 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 HHATQ5VTY9 493 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 LRFN4Q6PJG9 635 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 ZNF813Q6ZN06 617 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 GOLGA6L1Q8N7Z2 621 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 OR9I1Q8NGQ6 314 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 OR51F2Q8NH61 342 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms