RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 C3orf36Q3SXR2 165 aa18.67■□□□□ 0.58
PKP3-211ENST00000534401 HIKESHIQ53FT3 197 aa18.67■□□□□ 0.58
PKP3-211ENST00000534401 HMBOX1Q6NT76 420 aa18.67■□□□□ 0.58
PKP3-211ENST00000534401 NANOGNBQ7Z5D8 188 aa18.67■□□□□ 0.58
PKP3-211ENST00000534401 PIGTQ969N2 578 aa18.67■□□□□ 0.58
PKP3-211ENST00000534401 BPIFA2Q96DR5 249 aa18.67■□□□□ 0.58
PKP3-211ENST00000534401 PYURFQ96I23 114 aa18.67■□□□□ 0.58
PKP3-211ENST00000534401 FUZQ9BT04 418 aa18.67■□□□□ 0.58
PKP3-211ENST00000534401 C1orf21Q9H246 121 aa18.67■□□□□ 0.58
PKP3-211ENST00000534401 UBTD1Q9HAC8 227 aa18.67■□□□□ 0.58
PKP3-211ENST00000534401 CRLF2Q9HC73 371 aa18.67■□□□□ 0.58
PKP3-211ENST00000534401 RHCGQ9UBD6 479 aa18.67■□□□□ 0.58
PKP3-211ENST00000534401 MGAT4BQ9UQ53 548 aa18.67■□□□□ 0.58
PKP3-211ENST00000534401 HIF3AQ9Y2N7 669 aa18.67■□□□□ 0.58
PKP3-211ENST00000534401 A0A1W2PR80 420 aa18.66■□□□□ 0.58
PKP3-211ENST00000534401 PIP5K1CO60331 668 aa18.66■□□□□ 0.58
PKP3-211ENST00000534401 GMNNO75496 209 aa18.66■□□□□ 0.58
PKP3-211ENST00000534401 PAX1P15863 534 aa18.66■□□□□ 0.58
PKP3-211ENST00000534401 TCN1P20061 433 aaPredicted RBP18.66■□□□□ 0.58
PKP3-211ENST00000534401 CD40P25942 277 aa18.66■□□□□ 0.58
PKP3-211ENST00000534401 IL1RL1Q01638 556 aa18.66■□□□□ 0.58
PKP3-211ENST00000534401 HIST3H3Q16695 136 aa18.66■□□□□ 0.58
PKP3-211ENST00000534401 CEACAM16Q2WEN9 425 aa18.66■□□□□ 0.58
PKP3-211ENST00000534401 ANKDD1AQ495B1 522 aa18.66■□□□□ 0.58
PKP3-211ENST00000534401 ZNF672Q499Z4 452 aaPredicted RBP18.66■□□□□ 0.58
PKP3-211ENST00000534401 ALKBH2Q6NS38 261 aa18.66■□□□□ 0.58
PKP3-211ENST00000534401 KLHL17Q6TDP4 642 aa18.66■□□□□ 0.58
PKP3-211ENST00000534401 TMEM108Q6UXF1 575 aa18.66■□□□□ 0.58
PKP3-211ENST00000534401 MBOAT2Q6ZWT7 520 aa18.66■□□□□ 0.58
PKP3-211ENST00000534401 SLC7A13Q8TCU3 470 aa18.66■□□□□ 0.58
PKP3-211ENST00000534401 AKAP1Q92667 903 aaKnown RBP eCLIP18.66■□□□□ 0.58
PKP3-211ENST00000534401 SLC25A44Q96H78 314 aaPredicted RBP18.66■□□□□ 0.58
PKP3-211ENST00000534401 RADILQ96JH8 1075 aa18.66■□□□□ 0.58
PKP3-211ENST00000534401 MRPL13Q9BYD1 178 aaKnown RBP18.66■□□□□ 0.58
PKP3-211ENST00000534401 ZNF726A6NNF4 738 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 ZNF99A8MXY4 864 aaPredicted RBP18.65■□□□□ 0.58
PKP3-211ENST00000534401 CENPBD1B2RD01 187 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 BLOC1S5-TXNDC5H3BN57 136 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 RNF13O43567 381 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 WNT11O96014 354 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 DANCRP0C864 163 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 UMPSP11172 480 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 MAKP20794 623 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 AQP2P41181 271 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 ZNF83P51522 516 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 ZNF133P52736 654 aaPredicted RBP18.65■□□□□ 0.58
PKP3-211ENST00000534401 BIDP55957 195 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 CAMK2DQ13557 499 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 RINLQ6ZS11 566 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 TMPRSS11FQ6ZWK6 438 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 CYP4Z1Q86W10 505 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 NRMQ8IXM6 262 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 CCDC36Q8IYA8 594 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 LRRC75A-AS1Q8N1F1 130 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 LRRC75AQ8NAA5 344 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 BCAS4Q8TDM0 211 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 NSMCE2Q96MF7 247 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 TAS2R1Q9NYW7 299 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 ACTR3BQ9P1U1 418 aa18.65■□□□□ 0.58
PKP3-211ENST00000534401 IGLV1-44P01699 117 aa18.64■□□□□ 0.57
PKP3-211ENST00000534401 PGA4P0DJD7 388 aa18.64■□□□□ 0.57
PKP3-211ENST00000534401 PGA3P0DJD8 388 aa18.64■□□□□ 0.57
PKP3-211ENST00000534401 IFI30P13284 250 aa18.64■□□□□ 0.57
PKP3-211ENST00000534401 CDH2P19022 906 aaPredicted RBP18.64■□□□□ 0.57
PKP3-211ENST00000534401 MXRA7P84157 204 aa18.64■□□□□ 0.57
PKP3-211ENST00000534401 LAPTM4AQ15012 233 aa18.64■□□□□ 0.57
PKP3-211ENST00000534401 ARMC4Q5T2S8 1044 aa18.64■□□□□ 0.57
PKP3-211ENST00000534401 LRFN4Q6PJG9 635 aa18.64■□□□□ 0.57
PKP3-211ENST00000534401 TBPL2Q6SJ96 375 aa18.64■□□□□ 0.57
PKP3-211ENST00000534401 TRPM8Q7Z2W7 1104 aa18.64■□□□□ 0.57
PKP3-211ENST00000534401 KBTBD8Q8NFY9 601 aa18.64■□□□□ 0.57
PKP3-211ENST00000534401 MOSPD2Q8NHP6 518 aa18.64■□□□□ 0.57
PKP3-211ENST00000534401 NEUROG1Q92886 237 aa18.64■□□□□ 0.57
PKP3-211ENST00000534401 GRIP2Q9C0E4 1043 aa18.64■□□□□ 0.57
PKP3-211ENST00000534401 MOV10Q9HCE1 1003 aaKnown RBP18.64■□□□□ 0.57
PKP3-211ENST00000534401 B3GAT2Q9NPZ5 323 aa18.64■□□□□ 0.57
PKP3-211ENST00000534401 INIPQ9NRY2 104 aa18.64■□□□□ 0.57
PKP3-211ENST00000534401 GLTPQ9NZD2 209 aa18.64■□□□□ 0.57
PKP3-211ENST00000534401 M0R3G1 203 aa18.63■□□□□ 0.57
PKP3-211ENST00000534401 ABCD4O14678 606 aa18.63■□□□□ 0.57
PKP3-211ENST00000534401 BCL10O95999 233 aa18.63■□□□□ 0.57
PKP3-211ENST00000534401 H1F0P07305 194 aaKnown RBP18.63■□□□□ 0.57
PKP3-211ENST00000534401 HOXC12P31275 282 aa18.63■□□□□ 0.57
PKP3-211ENST00000534401 SLC9A3P48764 834 aa18.63■□□□□ 0.57
PKP3-211ENST00000534401 CARD17Q5XLA6 110 aa18.63■□□□□ 0.57
PKP3-211ENST00000534401 KRTAP1-3Q8IUG1 177 aa18.63■□□□□ 0.57
PKP3-211ENST00000534401 ASB10Q8WXI3 467 aa18.63■□□□□ 0.57
PKP3-211ENST00000534401 MUC13Q9H3R2 512 aa18.63■□□□□ 0.57
PKP3-211ENST00000534401 IL1RAPQ9NPH3 570 aa18.63■□□□□ 0.57
PKP3-211ENST00000534401 ZNF701Q9NV72 531 aaPredicted RBP18.63■□□□□ 0.57
PKP3-211ENST00000534401 B3GNT2Q9NY97 397 aa18.63■□□□□ 0.57
PKP3-211ENST00000534401 PRPF19Q9UMS4 504 aaKnown RBP18.63■□□□□ 0.57
PKP3-211ENST00000534401 ACANP16112 2415 aa18.63■□□□□ 0.57
PKP3-211ENST00000534401 OVOL3O00110 214 aa18.62■□□□□ 0.57
PKP3-211ENST00000534401 CLOCKO15516 846 aa18.62■□□□□ 0.57
PKP3-211ENST00000534401 IGKV3-15P01624 115 aa18.62■□□□□ 0.57
PKP3-211ENST00000534401 IGHMP01871 453 aa18.62■□□□□ 0.57
PKP3-211ENST00000534401 F13BP05160 661 aa18.62■□□□□ 0.57
PKP3-211ENST00000534401 ITGA2P17301 1181 aa18.62■□□□□ 0.57
PKP3-211ENST00000534401 CSNK1A1P48729 337 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms