RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 GFERP55789 205 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 NXNL2Q5VZ03 156 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 PGAP1Q75T13 922 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 GPR155Q7Z3F1 870 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 LINC00346Q8IVM7 164 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 SLC16A11Q8NCK7 471 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 OR4M1Q8NGD0 313 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 MS4A6EQ96DS6 147 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 TMEM38AQ9H6F2 299 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 DAPP1Q9UN19 280 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 IDSB3KWA1 339 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 TNFSF15O95150 251 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 COL5A3P25940 1745 aaPredicted RBP13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 COMTD1Q86VU5 262 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 MAML2Q8IZL2 1156 aaPredicted RBP13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 TCEAL2Q9H3H9 227 aaPredicted RBP13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 NOTOA8MTQ0 251 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 NSA2O95478 260 aaKnown RBP13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 APOC3P02656 99 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 EIF4EP06730 217 aaKnown RBP13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 HLA-DMAP28067 261 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 GRB2P62993 217 aaKnown RBP13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 BLOC1S1P78537 153 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 FAM219BQ5XKK7 198 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 C12orf45Q8N5I9 185 aaPredicted RBP13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 ACBD4Q8NC06 268 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 EDEM2Q9BV94 578 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 PPIL3Q9H2H8 161 aaKnown RBP13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 PRAMEF27A3QJZ7 478 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 DAPP51397 102 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 OR8B8Q15620 311 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 CPT2P23786 658 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 FPR3P25089 353 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 P2RX1P51575 399 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 TAS2R30P59541 319 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 PDLIM3Q53GG5 364 aaPredicted RBP13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 AADACL3Q5VUY0 350 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 KDM8Q8N371 416 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 C11orf40Q8WZ69 217 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 POLR2AP24928 1970 aaKnown RBP13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 OR6C65A6NJZ3 312 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 OR6C76A6NM76 312 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 ARPC5O15511 151 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 CR2P20023 1033 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 DLX5P56178 289 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 CCL7P80098 99 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 USF2Q15853 346 aaPredicted RBP13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 Q499Y3 187 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 OR2G6Q5TZ20 316 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 OR51D1Q8NGF3 324 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 PPA2Q9H2U2 334 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 FSCN3Q9NQT6 498 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 PPT2Q9UMR5 302 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 GSTP1P09211 210 aaKnown RBP13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 GABRG2P18507 467 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 PRAMEF9Q5VWM5 478 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 YRDCQ86U90 279 aaKnown RBP13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 WDR5BQ86VZ2 330 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 CCDC28AQ8IWP9 274 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 DMBX1Q8NFW5 382 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 OR6C6A6NF89 314 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 STK17BO94768 372 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 LIPCP11150 499 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 HTR2CP28335 458 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 C21orf33P30042 268 aaPredicted RBP13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 SLC1A3P43003 542 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 CLDN6P56747 220 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 ESPNLQ6ZVH7 1005 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 CAMKMTQ7Z624 323 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 BPIFB2Q8N4F0 458 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 GGHQ92820 318 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 SDSLQ96GA7 329 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 NMNAT3Q96T66 252 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 SSX3Q99909 188 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 NOX4Q9NPH5 578 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 ASIC5Q9NY37 505 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 MRPS28Q9Y2Q9 187 aaKnown RBP13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 LOXL2Q9Y4K0 774 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 ANKRD31Q8N7Z5 1873 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 ZNF732B4DXR9 585 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 FZD7O75084 574 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 SELEP16581 610 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 RAB5BP61020 215 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 SRPXP78539 464 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 FOXC1Q12948 553 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 ILKQ13418 452 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 GLB1L2Q8IW92 636 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 SFTPA1Q8IWL2 248 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 RAB3CQ96E17 227 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 ATPIF1Q9UII2 106 aa13.6□□□□□ -0.23
PCDHA9-202ENST00000532602 OR2W5A6NFC9 320 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 CRHBPP24387 322 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 RUNX2Q13950 521 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 FBXW12Q6X9E4 464 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 PIWIL3Q7Z3Z3 882 aaKnown RBP13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 MALSU1Q96EH3 234 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 ZNF583Q96ND8 569 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 MFFQ9GZY8 342 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 PRELID3BQ9Y3B1 194 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 FIGNL2A6NMB9 653 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms