RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 UNC79Q9P2D8 2635 aa12.76□□□□□ -0.37
CPSF1-206ENST00000531480 TRAV27A0A087WT01 109 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 SLC35F4A4IF30 521 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 C11orf98E9PRG8 122 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 C16orf97H3BN30 126 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 CLOCKO15516 846 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 OR10H3O60404 316 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 CCNB2O95067 398 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 ADAP00813 363 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 ITGA5P08648 1049 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 IFNGR1P15260 489 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 IGHV1-2P23083 117 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 DNAJA1P31689 397 aaKnown RBP12.75□□□□□ -0.37
CPSF1-206ENST00000531480 VHLP40337 213 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 HSPA13P48723 471 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 ERFP50548 548 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 TSPAN31Q12999 210 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 STK11Q15831 433 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 HIST3H3Q16695 136 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 ALG10Q5BKT4 473 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 ARMC4Q5T2S8 1044 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 NIPAL3Q6P499 406 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 CD300LDQ6UXZ3 194 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.75□□□□□ -0.37
CPSF1-206ENST00000531480 TMEM179BQ7Z7N9 219 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 CXorf67Q86X51 503 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-206ENST00000531480 C20orf196Q8IYI0 205 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 ZNF433Q8N7K0 673 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-206ENST00000531480 OR51A7Q8NH64 312 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 USB1Q9BQ65 265 aaKnown RBP12.75□□□□□ -0.37
CPSF1-206ENST00000531480 C9orf16Q9BUW7 83 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 MRPL13Q9BYD1 178 aaKnown RBP12.75□□□□□ -0.37
CPSF1-206ENST00000531480 TXNIPQ9H3M7 391 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 ASB6Q9NWX5 421 aa12.75□□□□□ -0.37
CPSF1-206ENST00000531480 A0A1W2PRG6 482 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 UNC119BA6NIH7 251 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 SLC43A1O75387 559 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 F13BP05160 661 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 PGA4P0DJD7 388 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 PGA3P0DJD8 388 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 PPP3CBP16298 524 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 MPGP29372 298 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 ZNF133P52736 654 aaPredicted RBP12.74□□□□□ -0.37
CPSF1-206ENST00000531480 PPP1R8Q12972 351 aaKnown RBP12.74□□□□□ -0.37
CPSF1-206ENST00000531480 ATP6AP1Q15904 470 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 ACKR1Q16570 336 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 C1QTNF12Q5T7M4 302 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 LINGO2Q7L985 606 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 FAM122BQ7Z309 247 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 SVOPLQ8N434 492 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 C1orf162Q8NEQ5 155 aaPredicted RBP12.74□□□□□ -0.37
CPSF1-206ENST00000531480 OR9Q2Q8NGE9 314 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 GNPDA2Q8TDQ7 276 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 ASB10Q8WXI3 467 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 TMEM54Q969K7 222 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 EME1Q96AY2 570 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 NRBF2Q96F24 287 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 SLC25A44Q96H78 314 aaPredicted RBP12.74□□□□□ -0.37
CPSF1-206ENST00000531480 DACH2Q96NX9 599 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 NRIP3Q9NQ35 241 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 TAS2R16Q9NYV7 291 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 KCNN3Q9UGI6 736 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 U3KQV3 271 aa12.74□□□□□ -0.37
CPSF1-206ENST00000531480 PRR14LQ5THK1 2151 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 MCIDASD6RGH6 385 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 H3BNX3 289 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 E2F6O75461 281 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 UPK3AO75631 287 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 TIPRLO75663 272 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 NDUFB2O95178 105 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 BCL10O95999 233 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 GASTP01350 101 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 IGHV3-9P01782 118 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 CD14P08571 375 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 APEHP13798 732 aaKnown RBP12.73□□□□□ -0.37
CPSF1-206ENST00000531480 DAP3P51398 398 aaKnown RBP12.73□□□□□ -0.37
CPSF1-206ENST00000531480 IST1P53990 364 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 FOXG1P55316 489 aaPredicted RBP12.73□□□□□ -0.37
CPSF1-206ENST00000531480 BIDP55957 195 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 IL1RL1Q01638 556 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 LGALS3BPQ08380 585 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 FAPQ12884 760 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 TRIP10Q15642 601 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 FAM205BPQ63HN1 556 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 SMARCD3Q6STE5 483 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 THSD4Q6ZMP0 1018 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 MEX3BQ6ZN04 569 aaKnown RBP12.73□□□□□ -0.37
CPSF1-206ENST00000531480 ZNF620Q6ZNG0 422 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 C22orf34Q6ZV56 151 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 ZNF627Q7L945 461 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 HDDC2Q7Z4H3 204 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 ABHD12BQ7Z5M8 362 aaPredicted RBP12.73□□□□□ -0.37
CPSF1-206ENST00000531480 HIPK1Q86Z02 1210 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 ZDHHC13Q8IUH4 622 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 PACRGLQ8N7B6 248 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 CLDN22Q8N7P3 220 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 STEAP2Q8NFT2 490 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 ZNF519Q8TB69 540 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 FAM222BQ8WU58 562 aa12.73□□□□□ -0.37
CPSF1-206ENST00000531480 KISS1RQ969F8 398 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms