RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 MEMO1Q9Y316 297 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 MMP24Q9Y5R2 645 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 ETV7Q9Y603 341 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 AK9Q5TCS8 1911 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 ZNF532Q9HCE3 1301 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 IGLV4-3A0A075B6K6 122 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 IQANK1A0A1B0GTG1 560 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 KBTBD11-OT1A0A1B0GTJ5 212 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 SRRM4A7MD48 611 aaKnown RBP4.68□□□□□ -1.66
PCF11-202ENST00000528336 A8MUA0 341 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 LMO7DNF2Z398 122 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 H0YL77 283 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 TRAFD1O14545 582 aaPredicted RBP4.68□□□□□ -1.66
PCF11-202ENST00000528336 RAB29O14966 203 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 RAD51BO15315 384 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 TNFSF12O43508 249 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 PRKAB2O43741 272 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 B3GAT3O94766 335 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 FCER2P06734 321 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 STSP08842 583 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 TSPAN8P19075 237 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 CNR1P21554 472 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 GATA2P23769 480 aaPredicted RBP4.68□□□□□ -1.66
PCF11-202ENST00000528336 UQCRFS1P47985 274 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 DUSP3P51452 185 aaPredicted RBP4.68□□□□□ -1.66
PCF11-202ENST00000528336 ATP1B3P54709 279 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 RAD51Q06609 339 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 CNTN1Q12860 1018 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 STX3Q13277 289 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 SNCBQ16143 134 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 C6orf183Q5T699 404 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 OR52W1Q6IF63 320 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 RFPL4BQ6ZWI9 263 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 GPBP1Q86WP2 473 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 TRIM69Q86WT6 500 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 FGFRL1Q8N441 504 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 SDR9C7Q8NEX9 313 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 OR10H4Q8NGA5 316 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 OR2L2Q8NH16 312 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 FANK1Q8TC84 345 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 SPPL2AQ8TCT8 520 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 CCDC124Q96CT7 223 aaKnown RBP4.68□□□□□ -1.66
PCF11-202ENST00000528336 BPIFA2Q96DR5 249 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 CPB2Q96IY4 423 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 SLC38A2Q96QD8 506 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 CCM2Q9BSQ5 444 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 DEFB129Q9H1M3 183 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 TUBB1Q9H4B7 451 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 RHOJQ9H4E5 214 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 HEXA-AS1Q9H8Q6 139 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 POLE4Q9NR33 117 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 TREX1Q9NSU2 369 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 CLN8Q9UBY8 286 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 NAGKQ9UJ70 344 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 TIMM10BQ9Y5J6 103 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 MAST2Q6P0Q8 1798 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 MYH13Q9UKX3 1938 aa4.68□□□□□ -1.66
PCF11-202ENST00000528336 CNTNAP1P78357 1384 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 RPAP1Q9BWH6 1393 aaPredicted RBP4.67□□□□□ -1.66
PCF11-202ENST00000528336 A0A1W2PPR1 153 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 A0A1W2PPV9 198 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 RAB19A4D1S5 217 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 GOLGA8IPA6NC78 632 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 OR5K4A6NMS3 321 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 NPIPA7E9PJI5 369 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 RNASEK-C17orf49H0YIS7 233 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 INPP4BO15327 924 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 CLOCKO15516 846 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 ZNF749O43361 778 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 VAPBO95292 243 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 GAPDHP04406 335 aaKnown RBP4.67□□□□□ -1.66
PCF11-202ENST00000528336 NPIPA8P0DM63 369 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 ADORA3P0DMS8 318 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 CD82P27701 267 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 PPP2R1BP30154 601 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 MATKP42679 507 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 HTR5AP47898 357 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 NDUFV3P56181 108 aaKnown RBP4.67□□□□□ -1.66
PCF11-202ENST00000528336 UBE2G2P60604 165 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 ADARB1P78563 741 aaKnown RBP4.67□□□□□ -1.66
PCF11-202ENST00000528336 FCHO2Q0JRZ9 810 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 ART3Q13508 389 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 MRPL23Q16540 153 aaKnown RBP4.67□□□□□ -1.66
PCF11-202ENST00000528336 SLC5A12Q1EHB4 618 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 TCTEX1D4Q5JR98 221 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 TMEM31Q5JXX7 168 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 AGAP7PQ5VUJ5 663 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 UQCC3Q6UW78 93 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 ANKRD37Q7Z713 158 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 RNF130Q86XS8 419 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 NUDCD3Q8IVD9 361 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 MMAAQ8IVH4 418 aaKnown RBP4.67□□□□□ -1.66
PCF11-202ENST00000528336 CMTM8Q8IZV2 173 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 CYB561A3Q8NBI2 242 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 FBXO36Q8NEA4 188 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 CD99L2Q8TCZ2 262 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 FAM151AQ8WW52 585 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 TCP11Q8WWU5 503 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 SLC35C1Q96A29 364 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 OPALINQ96PE5 141 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms