RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 HIST1H2ACQ93077 130 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 CDV3Q9UKY7 258 aaKnown RBP11.41□□□□□ -0.58
CAPN1-208ENST00000527323 ZNF346Q9UL40 294 aaKnown RBP11.41□□□□□ -0.58
CAPN1-208ENST00000527323 ICAM5Q9UMF0 924 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 MRPS2Q9Y399 296 aaKnown RBP11.41□□□□□ -0.58
CAPN1-208ENST00000527323 CNOT1A5YKK6 2376 aaKnown RBP11.41□□□□□ -0.58
CAPN1-208ENST00000527323 OR2M5A3KFT3 312 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 BLOC1S5-TXNDC5H3BN57 136 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 OR2A4O95047 310 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 RASGRP1O95267 797 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 GPR75O95800 540 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 AK1P00568 194 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 GLULP15104 373 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 DMWDQ09019 674 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 SMAD2Q15796 467 aaKnown RBP11.41□□□□□ -0.58
CAPN1-208ENST00000527323 OLFML2AQ68BL7 652 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 GSG1LQ6UXU4 331 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 ABHD13Q7L211 337 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 FAM220AQ7Z4H9 259 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.41□□□□□ -0.58
CAPN1-208ENST00000527323 GLB1L2Q8IW92 636 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 PDZD9Q8IXQ8 264 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 OR52R1Q8NGF1 315 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 NT5CQ8TCD5 201 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 ZNF578Q96N58 590 aaPredicted RBP11.41□□□□□ -0.58
CAPN1-208ENST00000527323 OR2A7Q96R45 310 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 FSCN3Q9NQT6 498 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 ING1Q9UK53 422 aaPredicted RBP11.41□□□□□ -0.58
CAPN1-208ENST00000527323 IKZF2Q9UKS7 526 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 FBXL3Q9UKT7 428 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 MEIS3P1A6NDR6 274 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 SPDEFO95238 335 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 VSIG10L2P0DP72 767 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 MYF5P13349 255 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 PPP3CBP16298 524 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 ADH7P40394 386 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 ACAA2P42765 397 aaKnown RBP11.41□□□□□ -0.58
CAPN1-208ENST00000527323 DHODHQ02127 395 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 FHL1Q13642 323 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 GK2Q14410 553 aaPredicted RBP11.41□□□□□ -0.58
CAPN1-208ENST00000527323 LEG1Q6P5S2 330 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 ULK3Q6PHR2 472 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 FIGLAQ6QHK4 219 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 CAMKVQ8NCB2 501 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 OR4N2Q8NGD1 307 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 OR5AK2Q8NH90 309 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 RERGQ96A58 199 aaPredicted RBP11.41□□□□□ -0.58
CAPN1-208ENST00000527323 MIB2Q96AX9 1013 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 WBP1Q96G27 269 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 TSSK2Q96PF2 358 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 OR2A5Q96R48 311 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 APOOQ9BUR5 198 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 SHARPINQ9H0F6 387 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 KIR3DX1Q9H7L2 352 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 RXFP3Q9NSD7 469 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 FBXL2Q9UKC9 423 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 SLC17A4Q9Y2C5 497 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 ENTPD2Q9Y5L3 495 aa11.41□□□□□ -0.58
CAPN1-208ENST00000527323 TP53BP1Q12888 1972 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-208ENST00000527323 TMEM72A0PK05 275 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 SLC22A23A1A5C7 686 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 SDC3O75056 442 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 SNAPC5O75971 98 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 APOC3P02656 99 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 CALCBP10092 127 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 RBM34P42696 430 aaKnown RBP11.4□□□□□ -0.58
CAPN1-208ENST00000527323 C2orf68Q2NKX9 166 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 KIRREL2Q6UWL6 708 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 DND1Q8IYX4 353 aaKnown RBP11.4□□□□□ -0.58
CAPN1-208ENST00000527323 STPG2Q8N412 459 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 ZNF454Q8N9F8 522 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 NPEPL1Q8NDH3 523 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 SLC22A18Q96BI1 424 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 DPYSL5Q9BPU6 564 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 ALG12Q9BV10 488 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 SRA1Q9HD15 236 aaKnown RBP11.4□□□□□ -0.58
CAPN1-208ENST00000527323 URB1O60287 2271 aaKnown RBP11.4□□□□□ -0.58
CAPN1-208ENST00000527323 TECTAO75443 2155 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 A0A087WV62 115 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 F5H5P2 479 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 TACSTD2P09758 323 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 TNFRSF4P43489 277 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 RPS21P63220 83 aaKnown RBP11.4□□□□□ -0.58
CAPN1-208ENST00000527323 LTBQ06643 244 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 GGTLC2Q14390 218 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 ZNHIT3Q15649 155 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-208ENST00000527323 PRRT3Q5FWE3 981 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 YOD1Q5VVQ6 348 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-208ENST00000527323 RNF44Q7L0R7 432 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 OR8S1Q8NH09 359 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 C15orf40Q8WUR7 153 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 RGP1Q92546 391 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-208ENST00000527323 Q96M85 177 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 TMPRSS13Q9BYE2 586 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 CACNA1CQ13936 2221 aa11.4□□□□□ -0.58
CAPN1-208ENST00000527323 A0A1B0GTH9 108 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 TOR1AO14656 332 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 B3GALNT1O75752 331 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 CD1AP06126 327 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms