RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 KCNS2Q9ULS6 477 aa4.59□□□□□ -1.67
CTNNA1-239ENST00000523685 PCNX3Q9H6A9 2034 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 A0A1W2PQD3 144 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 SAC3D1A6NKF1 404 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 OR5H1A6NKK0 313 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 KIF2AO00139 706 aaPredicted RBP4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 SULT2B1O00204 365 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 SLC28A1O00337 649 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 RRHO14718 337 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 SMAD9O15198 467 aaKnown RBP4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 RGS14O43566 566 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 H6PDO95479 791 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 HMGN2P05204 90 aaKnown RBP4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 LINC00032P0C843 101 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 TFPIP10646 304 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 SDC1P18827 310 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 USF1P22415 310 aaPredicted RBP4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 MAP3K8P41279 467 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 RPL38P63173 70 aaKnown RBP4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 CKAP4Q07065 602 aaKnown RBP4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 SELENBP1Q13228 472 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 QPRTQ15274 297 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 SEC23BQ15437 767 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 ANXA2RQ3ZCQ2 193 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 IQCCQ4KMZ1 466 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 ARL13AQ5H913 290 aaPredicted RBP4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 TIMM23BQ5SRD1 257 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 FAM120AOSQ5T036 256 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 DCST2Q5T1A1 773 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 C11orf71Q6IPW1 123 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 FAM166AQ6J272 317 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 ZYG11AQ6WRX3 759 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 B3GLCTQ6Y288 498 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 ZNF782Q6ZMW2 699 aaPredicted RBP4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 TIFABQ6ZNK6 161 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 CPOQ8IVL8 374 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 ZNF433Q8N7K0 673 aaPredicted RBP4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 GPR119Q8TDV5 335 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 ADAMTS15Q8TE58 950 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 C10orf105Q8TEF2 133 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 ZNF524Q96C55 264 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 FBXO17Q96EF6 278 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 FAM120BQ96EK7 910 aaKnown RBP4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 MAELQ96JY0 434 aaKnown RBP4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 TM2D2Q9BX73 214 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 FUT8Q9BYC5 575 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 EML4Q9HC35 981 aaKnown RBP4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 C1orf109Q9NX04 203 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 ICAM5Q9UMF0 924 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 FAF1Q9UNN5 650 aaPredicted RBP4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 MGAT4BQ9UQ53 548 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 WBP11Q9Y2W2 641 aaKnown RBP4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 NOSIPQ9Y314 301 aaKnown RBP4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 KCNE3Q9Y6H6 103 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.58□□□□□ -1.682e-6■■■□□ 15.3
CTNNA1-239ENST00000523685 CADP27708 2225 aa4.58□□□□□ -1.68
CTNNA1-239ENST00000523685 ZNF724A8MTY0 619 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 G3V2L1 256 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 CFLARO15519 480 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 ZNF264O43296 627 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 CYTIPO60759 359 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 HSPA4LO95757 839 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 TGFAP01135 160 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 CSF1P09603 554 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 IFI6P09912 130 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 UBTFL6P0CB48 400 aaPredicted RBP4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 UROSP10746 265 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 UBL4AP11441 157 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 CDH2P19022 906 aaPredicted RBP4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 CCNA2P20248 432 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 COX5AP20674 150 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 HNF1AP20823 631 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 PTAFRP25105 342 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 GCAP28676 217 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 LCN1P31025 176 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 RYKP34925 604 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 SOAT1P35610 550 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 HPCAL1P37235 193 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 SOX2P48431 317 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 CCT3P49368 545 aaKnown RBP4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 PDLIM4P50479 330 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 EFNA4P52798 201 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 ATP12AP54707 1039 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 FOXG1P55316 489 aaPredicted RBP4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 CHRNB3Q05901 458 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 MERTKQ12866 999 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 ALKBH1Q13686 389 aaKnown RBP4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 KIAA0040Q15053 153 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 GPR68Q15743 365 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 RFTN2Q52LD8 501 aaPredicted RBP4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 KLHL26Q53HC5 615 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 PDZK1Q5T2W1 519 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 LIPNQ5VXI9 398 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 LIPMQ5VYY2 423 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 FBXW9Q5XUX1 488 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 C3orf33Q6P1S2 294 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 ZCCHC12Q6PEW1 402 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 OLIG3Q7RTU3 272 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 P2RY8Q86VZ1 359 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms