RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 PAQR5Q9NXK6 330 aaPredicted RBP11.97□□□□□ -0.49
PCDHGB1-201ENST00000523390 SLC43A1O75387 559 aa11.96□□□□□ -0.49
PCDHGB1-201ENST00000523390 RAB3DO95716 219 aa11.96□□□□□ -0.49
PCDHGB1-201ENST00000523390 MT-ATP6P00846 226 aa11.96□□□□□ -0.49
PCDHGB1-201ENST00000523390 MSX1P28360 303 aa11.96□□□□□ -0.49
PCDHGB1-201ENST00000523390 ACKR1Q16570 336 aa11.96□□□□□ -0.49
PCDHGB1-201ENST00000523390 ZSCAN5BA6NJL1 495 aa11.96□□□□□ -0.49
PCDHGB1-201ENST00000523390 FAM166BA8MTA8 275 aa11.96□□□□□ -0.49
PCDHGB1-201ENST00000523390 CHRNB1P11230 501 aa11.96□□□□□ -0.49
PCDHGB1-201ENST00000523390 RPS19P39019 145 aaKnown RBP11.96□□□□□ -0.49
PCDHGB1-201ENST00000523390 HTR5AP47898 357 aa11.96□□□□□ -0.49
PCDHGB1-201ENST00000523390 CEBPGP53567 150 aa11.96□□□□□ -0.49
PCDHGB1-201ENST00000523390 CARD18P57730 90 aa11.96□□□□□ -0.49
PCDHGB1-201ENST00000523390 RPL18Q07020 188 aaKnown RBP11.96□□□□□ -0.49
PCDHGB1-201ENST00000523390 ZIC1Q15915 447 aa11.96□□□□□ -0.49
PCDHGB1-201ENST00000523390 FAM199XQ6PEV8 388 aaPredicted RBP11.96□□□□□ -0.49
PCDHGB1-201ENST00000523390 LIX1LQ8IVB5 337 aa11.96□□□□□ -0.49
PCDHGB1-201ENST00000523390 FER1L6-AS2Q96M78 137 aa11.96□□□□□ -0.49
PCDHGB1-201ENST00000523390 SLC5A7Q9GZV3 580 aa11.96□□□□□ -0.49
PCDHGB1-201ENST00000523390 LAT2Q9GZY6 243 aa11.96□□□□□ -0.49
PCDHGB1-201ENST00000523390 EMC3Q9P0I2 261 aa11.96□□□□□ -0.49
PCDHGB1-201ENST00000523390 ABRACLQ9P1F3 81 aa11.96□□□□□ -0.49
PCDHGB1-201ENST00000523390 TMEM129A0AVI4 362 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 SLC2A1P11166 492 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 UGT2B10P36537 528 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 RPL27P61353 136 aaKnown RBP11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 LTBQ06643 244 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 UBE3DQ7Z6J8 389 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 PIGQQ9BRB3 760 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 CALHM2Q9HA72 323 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 RHBDD3Q9Y3P4 386 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 WIF1Q9Y5W5 379 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 CACNG2Q9Y698 323 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 DICER1Q9UPY3 1922 aaKnown RBP11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 IFNA7P01567 189 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 APLNRP35414 380 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 CCL11P51671 97 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 RNF4P78317 190 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 TGFBR3Q03167 851 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 AQP6Q13520 282 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 Q499Y3 187 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 ZMAT1Q5H9K5 638 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 LIPNQ5VXI9 398 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 SFXN4Q6P4A7 337 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 CSNK2A3Q8NEV1 391 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 LGALS14Q8TCE9 139 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 BRIX1Q8TDN6 353 aaKnown RBP11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 NEURL2Q9BR09 285 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 WWTR1Q9GZV5 400 aa11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 PCYT1BQ9Y5K3 369 aaPredicted RBP11.96□□□□□ -0.5
PCDHGB1-201ENST00000523390 TMEM212A6NML5 194 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 LILRB5O75023 590 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 NKX2-2O95096 273 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 SERPINA5P05154 406 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 C3orf33Q6P1S2 294 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 COX15Q7KZN9 410 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 MFSD8Q8NHS3 518 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 TMEM246Q9BRR3 403 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 COPZ2Q9P299 210 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 KCNIP3Q9Y2W7 256 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 SBF1O95248 1867 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 ABCA7Q8IZY2 2146 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 TRDV1A0A1B0GX56 115 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 P2RY10O00398 339 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 CT62P0C5K7 136 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 PIPP12273 146 aaPredicted RBP11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 SPI1P17947 270 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 PNLIPRP2P54317 469 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 SF3A2Q15428 464 aaKnown RBP11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 HBMQ6B0K9 141 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 NINJ1Q92982 152 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 ZNF845Q96IR2 970 aaPredicted RBP11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 EDEM2Q9BV94 578 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 HCAR1Q9BXC0 346 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 VN1R1Q9GZP7 353 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 ACOXLQ9NUZ1 547 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 COLQQ9Y215 455 aaPredicted RBP11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 DOCK6Q96HP0 2047 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 FZD7O75084 574 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 GPX5O75715 221 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 IGHV3-9P01782 118 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 GNRHRP30968 328 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 DLSTP36957 453 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 ALKBH1Q13686 389 aaKnown RBP11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 UNQ6126/PRO20091Q6UXV3 157 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 DCXRQ7Z4W1 244 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 NRARPQ7Z6K4 114 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 CLDN22Q8N7P3 220 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 ACBD4Q8NC06 268 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 FAM83FQ8NEG4 500 aaPredicted RBP11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 OR5H2Q8NGV7 314 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 CDCA4Q9BXL8 241 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 NRIP3Q9NQ35 241 aa11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 ZNF346Q9UL40 294 aaKnown RBP11.95□□□□□ -0.5
PCDHGB1-201ENST00000523390 TRBV5-3A0A0A0MS03 114 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 EIF1BO60739 113 aaKnown RBP11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 ENPP1P22413 925 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 GIFP27352 417 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 EPHA8P29322 1005 aaPredicted RBP11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 APOBEC1P41238 236 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms