RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 ZNF639Q9UID6 485 aa1.4□□□□□ -2.19
PCM1-217ENST00000522998 TBX21Q9UL17 535 aa1.4□□□□□ -2.19
PCM1-217ENST00000522998 MMP17Q9ULZ9 603 aa1.4□□□□□ -2.19
PCM1-217ENST00000522998 PEX16Q9Y5Y5 336 aa1.4□□□□□ -2.19
PCM1-217ENST00000522998 FCGBPQ9Y6R7 5405 aaPredicted RBP1.4□□□□□ -2.19
PCM1-217ENST00000522998 CDHR2Q9BYE9 1310 aa1.4□□□□□ -2.19
PCM1-217ENST00000522998 KANK1Q14678 1352 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 PLAC8L1A1L4L8 177 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 GOLGA8SH3BPF8 625 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 SUPT3HO75486 399 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 SURF6O75683 361 aaKnown RBP1.39□□□□□ -2.19
PCM1-217ENST00000522998 IL1BP01584 269 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 PLEKP08567 350 aaPredicted RBP1.39□□□□□ -2.19
PCM1-217ENST00000522998 CSF3P09919 207 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 GKN3PP0CG01 181 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 SMIM10L1P0DMW3 83 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 TCN1P20061 433 aaPredicted RBP1.39□□□□□ -2.19
PCM1-217ENST00000522998 EPS15P42566 896 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 CXCL5P42830 114 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 SSR1P43307 286 aaKnown RBP1.39□□□□□ -2.19
PCM1-217ENST00000522998 GPR6P46095 362 aaPredicted RBP1.39□□□□□ -2.19
PCM1-217ENST00000522998 AIF1P55008 147 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 SEC61GP60059 68 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 PFN3P60673 137 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 RPL23AP62750 156 aaKnown RBP1.39□□□□□ -2.19
PCM1-217ENST00000522998 REG3AQ06141 175 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 ENPEPQ07075 957 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 MRPL28Q13084 256 aaKnown RBP1.39□□□□□ -2.19
PCM1-217ENST00000522998 PDIA2Q13087 525 aaKnown RBP1.39□□□□□ -2.19
PCM1-217ENST00000522998 C16orf72Q14CZ0 275 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 GUCA2BQ16661 112 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 TMEM183BQ1AE95 376 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 RSPO1Q2MKA7 263 aaPredicted RBP1.39□□□□□ -2.19
PCM1-217ENST00000522998 C6orf226Q5I0X4 101 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 COA6Q5JTJ3 125 aaKnown RBP1.39□□□□□ -2.19
PCM1-217ENST00000522998 OR2A2Q6IF42 318 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 PMF1Q6P1K2 205 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 TRIM40Q6P9F5 258 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 CASC1Q6TDU7 716 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 ZFP2Q6ZN57 461 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 H2AFVQ71UI9 128 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 UTS2BQ765I0 119 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 TMEM183AQ8IXX5 376 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 TBC1D21Q8IYX1 336 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 ZADH2Q8N4Q0 377 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 ZNF557Q8N988 423 aaPredicted RBP1.39□□□□□ -2.19
PCM1-217ENST00000522998 OR1L4Q8NGR5 311 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 ZNF596Q8TC21 504 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 FAM110BQ8TC76 370 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 CD300LFQ8TDQ1 290 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.39□□□□□ -2.19
PCM1-217ENST00000522998 EXOSC8Q96B26 276 aaKnown RBP1.39□□□□□ -2.19
PCM1-217ENST00000522998 AURKBQ96GD4 344 aaPredicted RBP1.39□□□□□ -2.19
PCM1-217ENST00000522998 SMIM10Q96HG1 83 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 OR8B4Q96RC9 309 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 TAAR1Q96RJ0 339 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 CNN2Q99439 309 aaKnown RBP1.39□□□□□ -2.19
PCM1-217ENST00000522998 CCT7Q99832 543 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 MFFQ9GZY8 342 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 PPA2Q9H2U2 334 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 CDC42EP4Q9H3Q1 356 aaKnown RBP1.39□□□□□ -2.19
PCM1-217ENST00000522998 LRRC40Q9H9A6 602 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 UGT1A7Q9HAW7 530 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 UGT1A10Q9HAW8 530 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 UGT1A8Q9HAW9 530 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 NTN4Q9HB63 628 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 TM9SF3Q9HD45 589 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 CTPS2Q9NRF8 586 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 CLEC4AQ9UMR7 237 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 PSG11Q9UQ72 335 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 ANKRD12Q6UB98 2062 aa1.39□□□□□ -2.19
PCM1-217ENST00000522998 FBN1P35555 2871 aaKnown RBP1.39□□□□□ -2.19
PCM1-217ENST00000522998 IGLV11-55A0A075B6I3 123 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 A0A0U1RQS6 177 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 FAM240BA0A1B0GVZ2 78 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 OR52A4PA6NMU1 304 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 TMX2-CTNND1H3BSU7 103 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 MGRN1O60291 552 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 TOM1O60784 492 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 ZNF324O75467 553 aaPredicted RBP1.38□□□□□ -2.19
PCM1-217ENST00000522998 C1orf105O95561 183 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 BGLAPP02818 100 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 GAPDHP04406 335 aaKnown RBP1.38□□□□□ -2.19
PCM1-217ENST00000522998 ALDOBP05062 364 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 C2P06681 752 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 ZDHHC11BP0C7U3 371 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 ATP1B2P14415 290 aaPredicted RBP1.38□□□□□ -2.19
PCM1-217ENST00000522998 HSD17B2P37059 387 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 GYG1P46976 350 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 MNAT1P51948 309 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 ZNF136P52737 540 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 SUB1P53999 127 aaKnown RBP eCLIP1.38□□□□□ -2.19
PCM1-217ENST00000522998 CDH4P55283 916 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 HMGCS1Q01581 520 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 PPIL2Q13356 520 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 EIF4EBP1Q13541 118 aaPredicted RBP1.38□□□□□ -2.19
PCM1-217ENST00000522998 GGTLC2Q14390 218 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 CTSL3PQ5NE16 218 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 VAX1Q5SQQ9 334 aa1.38□□□□□ -2.19
PCM1-217ENST00000522998 LCN12Q6JVE5 192 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms