RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 UBQLN4Q9NRR5 601 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 FOXE1O00358 373 aaPredicted RBP12.3□□□□□ -0.44
TCOF1-214ENST00000515035 HPNP05981 417 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 KIR2DS3Q14952 304 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 SLC36A2Q495M3 483 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 OR52E1Q8NGJ3 308 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 OR5D18Q8NGL1 313 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 SLC22A11Q9NSA0 550 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 PKD1L3Q7Z443 1732 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 NUDT19A8MXV4 375 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 H3BQ06 376 aaPredicted RBP12.3□□□□□ -0.44
TCOF1-214ENST00000515035 FCGR2AP12318 317 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 NFYBP25208 207 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 PSMB5P28074 263 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 MTCP1P56278 107 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 RAB11AP62491 216 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 LTB4RQ15722 352 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 RNLSQ5VYX0 342 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 SAXO2Q658L1 398 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 ZNF765Q7L2R6 523 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 ARHGAP9Q9BRR9 750 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 POFUT1Q9H488 388 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 EXOSC3Q9NQT5 275 aaKnown RBP12.3□□□□□ -0.44
TCOF1-214ENST00000515035 TRPM3Q9HCF6 1732 aaPredicted RBP12.3□□□□□ -0.44
TCOF1-214ENST00000515035 GABARAPH6UMI1 98 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 AKR7A2O43488 359 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 OR2F2O95006 317 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 GPR75O95800 540 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 GPX2P18283 190 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 SRMP19623 302 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 BAXQ07812 192 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 OR2F1Q13607 317 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 CDH26Q8IXH8 852 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 C15orf54Q8N8G6 183 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 OSGIN2Q9Y236 505 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 GPR55Q9Y2T6 319 aaPredicted RBP12.3□□□□□ -0.44
TCOF1-214ENST00000515035 MYH1P12882 1939 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 TMEM129A0AVI4 362 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 GPX5O75715 221 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 CLDN1O95832 211 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 CBX7O95931 251 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 PMP2P02689 132 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 NAGAP17050 411 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 NPY4RP50391 375 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 CATR1Q13166 79 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 RNF212Q495C1 297 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 COX20Q5RI15 118 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 PHYHD1Q5SRE7 291 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 GLYATL3Q5SZD4 288 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 KCTD11Q693B1 232 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 OR1M1Q8NGA1 313 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 TMED6Q8WW62 240 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 VN1R3Q9BXE9 311 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 STARD5Q9NSY2 213 aa12.3□□□□□ -0.44
TCOF1-214ENST00000515035 LOC100289279A0A1B0GTE1 492 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 RNF212BA8MTL3 300 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 TO15178 435 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 AIFM1O95831 613 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 DDAH2O95865 285 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 OPN1LWP04000 364 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 GABRB1P18505 474 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 RABIFP47224 123 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 ALKBH1Q13686 389 aaKnown RBP12.29□□□□□ -0.44
TCOF1-214ENST00000515035 RHOUQ7L0Q8 258 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 DPPA4Q7L190 304 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 NAA40Q86UY6 237 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 WDR5BQ86VZ2 330 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 TEX37Q96LM6 180 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 SLC25A32Q9H2D1 315 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 SPACA1Q9HBV2 294 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 OR52A1Q9UKL2 312 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 MYH13Q9UKX3 1938 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 PHF1O43189 567 aaPredicted RBP12.29□□□□□ -0.44
TCOF1-214ENST00000515035 FPR3P25089 353 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 PSMB3P49720 205 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 CAMK2BQ13554 666 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 SLC14A2Q15849 920 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 TRNP1Q6NT89 227 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 OR6M1Q8NGM8 313 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 WDR76Q9H967 626 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 FN3KRPQ9HA64 309 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 ATP13A2Q9NQ11 1180 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 HIF1ANQ9NWT6 349 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 SPHK1Q9NYA1 384 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 C4AP0C0L4 1744 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 LGI1O95970 557 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 FURINP09958 794 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 NPBWR1P48145 328 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 UBE2IP63279 158 aaKnown RBP12.29□□□□□ -0.44
TCOF1-214ENST00000515035 CD300LGQ6UXG3 332 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 ADGRE4PQ86SQ3 457 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 SYT9Q86SS6 491 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 SLC22A24Q8N4F4 322 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 C1orf198Q9H425 327 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 CXorf36Q9H7Y0 433 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 HSFX1Q9UBD0 423 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 SLC23A2Q9UGH3 650 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 RPH3ALQ9UNE2 315 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 OR52I2Q8NH67 350 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 SGPP1Q9BX95 441 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms