RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 ALDH3A1P30838 453 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 RPL3P39023 403 aaKnown RBP5.75□□□□□ -1.49
COPS4-209ENST00000511653 CCT5P48643 541 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 CHRNB3Q05901 458 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 LGALS3BPQ08380 585 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 DYRK1AQ13627 763 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 FHL3Q13643 280 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 KRTAP19-4Q3LI73 84 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 LSM12Q3MHD2 195 aaKnown RBP5.75□□□□□ -1.49
COPS4-209ENST00000511653 OR4F3Q6IEY1 312 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 OR7E24Q6IFN5 339 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 LIN54Q6MZP7 749 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 TNFAIP8L2Q6P589 184 aaPredicted RBP5.75□□□□□ -1.49
COPS4-209ENST00000511653 C16orf62Q7Z3J2 963 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 GRINAQ7Z429 371 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 MYPOPQ86VE0 399 aaPredicted RBP5.75□□□□□ -1.49
COPS4-209ENST00000511653 ANKRD46Q86W74 232 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 ADGRG3Q86Y34 549 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 FNDC5Q8NAU1 212 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 MNS1Q8NEH6 495 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 ZNF563Q8TA94 476 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 ANP32BQ92688 251 aaKnown RBP5.75□□□□□ -1.49
COPS4-209ENST00000511653 RAB8BQ92930 207 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 ZHX1-C8orf76Q96EF9 292 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 PPP3R2Q96LZ3 170 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 RHOXF2Q9BQY4 288 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 DUSP26Q9BV47 211 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 KRTAP4-8Q9BYQ9 185 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 OR51I1Q9H343 314 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 FKRPQ9H9S5 495 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 AKIP1Q9NQ31 210 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 SERINC1Q9NRX5 453 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 ATAD3AQ9NVI7 634 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 SLC17A7Q9P2U7 560 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 DKK2Q9UBU2 259 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 NDRG4Q9ULP0 352 aaKnown RBP5.75□□□□□ -1.49
COPS4-209ENST00000511653 HDGFL3Q9Y3E1 203 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 WDR45Q9Y484 360 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 SPIN1Q9Y657 262 aaPredicted RBP5.75□□□□□ -1.49
COPS4-209ENST00000511653 IGHV1-18A0A0C4DH31 117 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 TMEM72A0PK05 275 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 UNC119BA6NIH7 251 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 NDUFS8O00217 210 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 LYPLA1O75608 230 aaPredicted RBP5.75□□□□□ -1.49
COPS4-209ENST00000511653 AK1P00568 194 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 TGFAP01135 160 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 CSTBP04080 98 aaKnown RBP5.75□□□□□ -1.49
COPS4-209ENST00000511653 ZNF23P17027 643 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 APOBEC1P41238 236 aaKnown RBP5.75□□□□□ -1.49
COPS4-209ENST00000511653 MAGEA8P43361 318 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 IDH2P48735 452 aaKnown RBP5.75□□□□□ -1.49
COPS4-209ENST00000511653 ANXA11P50995 505 aaKnown RBP5.75□□□□□ -1.49
COPS4-209ENST00000511653 TUBA1BP68363 451 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 TUBA4AP68366 448 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 SLC17A1Q14916 467 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 BEAN1Q3B7T3 259 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 TUBA1AQ71U36 451 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 LINGO2Q7L985 606 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 SPATA19Q7Z5L4 167 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 IFT20Q8IY31 132 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 C17orf78Q8N4C9 275 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.75□□□□□ -1.49
COPS4-209ENST00000511653 ZIC4Q8N9L1 334 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 CNOT9Q92600 299 aaKnown RBP5.75□□□□□ -1.49
COPS4-209ENST00000511653 ROPN1LQ96C74 230 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 APOPT1Q96IL0 206 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 ZNF385AQ96PM9 386 aaKnown RBP5.75□□□□□ -1.49
COPS4-209ENST00000511653 ALKBH3Q96Q83 286 aaPredicted RBP5.75□□□□□ -1.49
COPS4-209ENST00000511653 CA10Q9NS85 328 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 TMEM181Q9P2C4 612 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 UPB1Q9UBR1 384 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 ZDHHC2Q9UIJ5 367 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 OSGIN1Q9UJX0 560 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 SLC35A3Q9Y2D2 325 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 SLC9A8Q9Y2E8 581 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 AMDHD2Q9Y303 409 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 FKBP7Q9Y680 259 aa5.75□□□□□ -1.49
COPS4-209ENST00000511653 TMED7-TICAM2A0A0A6YYA0 188 aa5.74□□□□□ -1.49
COPS4-209ENST00000511653 LOC390937A0A1W2PQ73 354 aa5.74□□□□□ -1.49
COPS4-209ENST00000511653 DIRC3C9JPN6 131 aa5.74□□□□□ -1.49
COPS4-209ENST00000511653 NR5A2O00482 541 aa5.74□□□□□ -1.49
COPS4-209ENST00000511653 ANKRD28O15084 1053 aa5.74□□□□□ -1.49
COPS4-209ENST00000511653 SCN2BO60939 215 aa5.74□□□□□ -1.49
COPS4-209ENST00000511653 LGI1O95970 557 aa5.74□□□□□ -1.49
COPS4-209ENST00000511653 IGFBP1P08833 259 aaPredicted RBP5.74□□□□□ -1.49
COPS4-209ENST00000511653 ITGA2P17301 1181 aa5.74□□□□□ -1.49
COPS4-209ENST00000511653 HNF1AP20823 631 aa5.74□□□□□ -1.49
COPS4-209ENST00000511653 PRPS1L1P21108 318 aa5.74□□□□□ -1.49
COPS4-209ENST00000511653 MPGP29372 298 aa5.74□□□□□ -1.49
COPS4-209ENST00000511653 CALCRP30988 508 aa5.74□□□□□ -1.49
COPS4-209ENST00000511653 SELENOPP49908 381 aa5.74□□□□□ -1.49
COPS4-209ENST00000511653 LOXL3P58215 753 aa5.74□□□□□ -1.49
COPS4-209ENST00000511653 SNRPD2P62316 118 aaKnown RBP5.74□□□□□ -1.49
COPS4-209ENST00000511653 PLP2Q04941 152 aa5.74□□□□□ -1.49
COPS4-209ENST00000511653 TRIP10Q15642 601 aa5.74□□□□□ -1.49
COPS4-209ENST00000511653 ADIPOQQ15848 244 aa5.74□□□□□ -1.49
COPS4-209ENST00000511653 ZSWIM7Q19AV6 140 aa5.74□□□□□ -1.49
COPS4-209ENST00000511653 TBRG1Q3YBR2 411 aa5.74□□□□□ -1.49
COPS4-209ENST00000511653 AP1ARQ63HQ0 302 aa5.74□□□□□ -1.49
COPS4-209ENST00000511653 RGS7BPQ6MZT1 257 aaPredicted RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms