RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 CRIM1Q9NZV1 1036 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 DNAJB9Q9UBS3 223 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 U3KQV3 271 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 CIB4A0PJX0 185 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 ARRDC5A6NEK1 342 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 CENPBD1B2RD01 187 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 E2F6O75461 281 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 RAD51DO75771 328 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 NDUFB2O95178 105 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 ITGA5P08648 1049 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 CSNK1A1P48729 337 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 ACTR3P61158 418 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 ROR2Q01974 943 aaKnown RBP11.33□□□□□ -0.6
COL6A6-203ENST00000511332 TOP3AQ13472 1001 aaPredicted RBP11.33□□□□□ -0.6
COL6A6-203ENST00000511332 CAMK2DQ13557 499 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 SNTB1Q13884 538 aaKnown RBP11.33□□□□□ -0.6
COL6A6-203ENST00000511332 ACKR1Q16570 336 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 MICAQ29983 383 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 C1QTNF12Q5T7M4 302 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 CARD17Q5XLA6 110 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 ZNF787Q6DD87 383 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 HMBOX1Q6NT76 420 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 RPL13AP3Q6NVV1 102 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 C1orf94Q6P1W5 598 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 PGBD2Q6P3X8 592 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 NHLRC1Q6VVB1 395 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 ZER1Q7Z7L7 766 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 P2RY8Q86VZ1 359 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 C20orf196Q8IYI0 205 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 C10orf67Q8IYJ2 551 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 C17orf78Q8N4C9 275 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 NOXO1Q8NFA2 376 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 OR9Q2Q8NGE9 314 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 OR6N1Q8NGY5 312 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 LINC01560Q8TB33 94 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 ASB10Q8WXI3 467 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 SLCO4A1Q96BD0 722 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 S100PBPQ96BU1 408 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 DUS3LQ96G46 650 aaKnown RBP11.33□□□□□ -0.6
COL6A6-203ENST00000511332 TXNDC15Q96J42 360 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 TNFRSF13CQ96RJ3 184 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 EMC6Q9BV81 110 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 POLDIP3Q9BY77 421 aaKnown RBP11.33□□□□□ -0.6
COL6A6-203ENST00000511332 ULBP2Q9BZM5 246 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 ARMC1Q9NVT9 282 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 VNN3Q9NY84 501 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 SIGLEC7Q9Y286 467 aa11.33□□□□□ -0.6
COL6A6-203ENST00000511332 A6NIZ1 184 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 RPL36A-HNRNPH2H7BZ11 118 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 CASKO14936 926 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 UPK3AO75631 287 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 TIPRLO75663 272 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 CD14P08571 375 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 PGA4P0DJD7 388 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 PGA3P0DJD8 388 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 EPXP11678 715 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 SSTR2P30874 369 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 GSSP48637 474 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 ARHGDIAP52565 204 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 CLRN1P58418 232 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 CTXN1P60606 82 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 RAP1BP61224 184 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 RPL27P61353 136 aaKnown RBP11.32□□□□□ -0.6
COL6A6-203ENST00000511332 RAP1AP62834 184 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 LGALS3BPQ08380 585 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 TSPAN31Q12999 210 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 FHL1Q13642 323 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 LAPTM4AQ15012 233 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 TSC22D1Q15714 1073 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 STK11Q15831 433 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 TIMM23BQ5SRD1 257 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 HIST2H2BCQ6DN03 193 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 ZNF770Q6IQ21 691 aaPredicted RBP11.32□□□□□ -0.6
COL6A6-203ENST00000511332 SMARCD3Q6STE5 483 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 KLHL24Q6TFL4 600 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 IGFN1Q86VF2 1251 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 LRRC75AQ8NAA5 344 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 AQP11Q8NBQ7 271 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 OR10G2Q8NGC3 310 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 C14orf79Q96F83 325 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 WFIKKN1Q96NZ8 548 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 GPX7Q96SL4 187 aaPredicted RBP11.32□□□□□ -0.6
COL6A6-203ENST00000511332 KATNB1Q9BVA0 655 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 CRLF2Q9HC73 371 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 GPR35Q9HC97 309 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 MGAT4BQ9UQ53 548 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 AP4S1Q9Y587 144 aa11.32□□□□□ -0.6
COL6A6-203ENST00000511332 OR5H1A6NKK0 313 aa11.31□□□□□ -0.6
COL6A6-203ENST00000511332 M0R3G1 203 aa11.31□□□□□ -0.6
COL6A6-203ENST00000511332 ACADSP16219 412 aa11.31□□□□□ -0.6
COL6A6-203ENST00000511332 GSTM3P21266 225 aa11.31□□□□□ -0.6
COL6A6-203ENST00000511332 FASP25445 335 aa11.31□□□□□ -0.6
COL6A6-203ENST00000511332 SLC6A6P31641 620 aa11.31□□□□□ -0.6
COL6A6-203ENST00000511332 PPP1R8Q12972 351 aaKnown RBP11.31□□□□□ -0.6
COL6A6-203ENST00000511332 KPNB1Q14974 876 aaKnown RBP11.31□□□□□ -0.6
COL6A6-203ENST00000511332 ATP6AP1Q15904 470 aa11.31□□□□□ -0.6
COL6A6-203ENST00000511332 ZSCAN26Q16670 478 aa11.31□□□□□ -0.6
COL6A6-203ENST00000511332 CEACAM16Q2WEN9 425 aa11.31□□□□□ -0.6
COL6A6-203ENST00000511332 ARMC4Q5T2S8 1044 aa11.31□□□□□ -0.6
COL6A6-203ENST00000511332 C9orf135Q5VTT2 229 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms