RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, human

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL4A3BP-205	ENST00000508692	TOP1	P11387	765 aa	Known RBP	2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	OTX1	P32242	354 aa	Predicted RBP	2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	SUB1	P53999	127 aa	Known RBP eCLIP	2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	SRSF5	Q13243	272 aa	Known RBP	2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	CUL2	Q13617	745 aa		2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	KIAA0087	Q14695	138 aa		2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	HSP90AB3P	Q58FF7	597 aa		2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	LRRC10	Q5BKY1	277 aa		2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	COA6	Q5JTJ3	125 aa	Known RBP	2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	LCE3E	Q5T5B0	92 aa		2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	PRAMEF20	Q5VT98	475 aa		2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	RFLNA	Q6ZTI6	216 aa		2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	CENPQ	Q7L2Z9	268 aa	Predicted RBP	2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	LHFPL3	Q86UP9	236 aa		2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	RALGPS2	Q86X27	583 aa	Predicted RBP	2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	MFSD6L	Q8IWD5	586 aa		2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	FAM71E2	Q8N5Q1	922 aa		2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	B3GNT7	Q8NFL0	401 aa		2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	OR2G3	Q8NGZ4	309 aa		2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	PLPPR1	Q8TBJ4	325 aa		2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	MYDGF	Q969H8	173 aa		2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	SLC38A4	Q969I6	547 aa		2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	MCUR1	Q96AQ8	359 aa		2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	RPUSD4	Q96CM3	377 aa	Known RBP	2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	HES7	Q9BYE0	225 aa		2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	DEFB127	Q9H1M4	99 aa		2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	EML4	Q9HC35	981 aa	Known RBP	2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	NEK6	Q9HC98	313 aa		2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	RPS6KB2	Q9UBS0	482 aa		2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	PACSIN2	Q9UNF0	486 aa	Predicted RBP	2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	CELA1	Q9UNI1	258 aa		2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	2.58	□□□□□ -2
COL4A3BP-205	ENST00000508692	IGLV3-22	A0A075B6J6	115 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692		A0A075B6Q4	140 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692		A0A0B4J2A0	478 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	TRBV11-1	A0A0K0K1C0	115 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	TCP11X1	B4DZS4	312 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692		H3BNH8	94 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	PEX7	O00628	323 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	GOSR2	O14653	212 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	INS	P01308	110 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	ALDOB	P05062	364 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	PNMA6A	P0CW24	399 aa	Predicted RBP	2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	NR2C1	P13056	603 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	NUDT1	P36639	197 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	CTRL	P40313	264 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	ACLY	P53396	1101 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	CDH6	P55285	790 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	GPX6	P59796	221 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	ACVR1	Q04771	509 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	ENPEP	Q07075	957 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	DAZ2	Q13117	558 aa	Known RBP	2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	MPPED2	Q15777	294 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	KRTAP13-3	Q3SY46	172 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	CTRB2	Q6GPI1	263 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	FRMPD2B	Q6IN97	320 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	CNIH2	Q6PI25	160 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	CAMK2N1	Q7Z7J9	78 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	TMEM61	Q8N0U2	210 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	LIX1	Q8N485	282 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	CCDC54	Q8NEL0	328 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	OR4F15	Q8NGB8	312 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	RHEBL1	Q8TAI7	183 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	BLOC1S5	Q8TDH9	187 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	CXorf40A	Q8TE69	158 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	CYYR1	Q96J86	154 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	CHP1	Q99653	195 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	DAZ3	Q9NR90	486 aa	Known RBP	2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	CCL28	Q9NRJ3	127 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	SHPK	Q9UHJ6	478 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	ZNF225	Q9UK10	706 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	LRRK1	Q38SD2	2015 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	NSD2	O96028	1365 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	MSH6	P52701	1360 aa		2.57	□□□□□ -2
COL4A3BP-205	ENST00000508692	ADAMTS9	Q9P2N4	1935 aa		2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	PINLYP	A6NC86	204 aa		2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	NKX2-6	A6NCS4	301 aa		2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	XKRY	O14609	159 aa		2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	CLOCK	O15516	846 aa		2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	EIF3G	O75821	320 aa	Known RBP eCLIP	2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	FTH1	P02794	183 aa		2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	CT62	P0C5K7	136 aa		2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	GKN3P	P0CG01	181 aa		2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	SMIM10L1	P0DMW3	83 aa		2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	ZNF43	P17038	809 aa		2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	CCNC	P24863	283 aa		2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	RRM2	P31350	389 aa		2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	HNRNPH3	P31942	346 aa	Known RBP	2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	DRD3	P35462	400 aa		2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	SSR4	P51571	173 aa		2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	RGS8	P57771	180 aa	Predicted RBP	2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	CCNA1	P78396	465 aa		2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	ZNF630	Q2M218	657 aa	Predicted RBP	2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	RFX4	Q33E94	735 aa		2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	C2orf83	Q53S99	150 aa		2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	SPANXN2	Q5MJ10	180 aa		2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	SLC8B1	Q6J4K2	584 aa		2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	CERS6	Q6ZMG9	384 aa		2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	COX15	Q7KZN9	410 aa		2.56	□□□□□ -2
COL4A3BP-205	ENST00000508692	C6orf120	Q7Z4R8	191 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms