RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 CHRNB3Q05901 458 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 ZFP36L1Q07352 338 aaKnown RBP2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 ITGB3BPQ13352 177 aaPredicted RBP2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 ASAH1Q13510 395 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 RUNX3Q13761 415 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 PPP1R7Q15435 360 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 TGIF1Q15583 401 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 DMRTC1Q5HYR2 192 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 PRAMEF20Q5VT98 475 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 SLC22A10Q63ZE4 541 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 KDM7AQ6ZMT4 941 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 DNM1P46Q6ZS02 220 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 H2BFWTQ7Z2G1 175 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 ECHDC2Q86YB7 292 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 EGFL6Q8IUX8 553 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 NAXDQ8IW45 347 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 SVOPLQ8N434 492 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 POM121L12Q8N7R1 296 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 CEP112Q8N8E3 955 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 AGAP11Q8TF27 550 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 HTR3CQ8WXA8 447 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 IFT74Q96LB3 600 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 CCT8L2Q96SF2 557 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 CHIAQ9BZP6 476 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 FAM192AQ9GZU8 254 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 LY9Q9HBG7 655 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 ZFP14Q9HCL3 533 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 B3GNT2Q9NY97 397 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 PDE10AQ9Y233 779 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 PLLPQ9Y342 182 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 CAB39Q9Y376 341 aaPredicted RBP2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 WDFY4Q6ZS81 3184 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 CACNA1AO00555 2505 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 LAMA4Q16363 1823 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 GVINP1Q7Z2Y8 2422 aa2.49□□□□□ -2.01
TRAPPC11-205ENST00000506426 DNAH14Q0VDD8 3507 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 NRCAMQ92823 1304 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 LRRK1Q38SD2 2015 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 IQANK1A0A1B0GTG1 560 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 SMIM28A0A1B0GU29 152 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 A0A1B0GWB2 263 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 ERICH2A1L162 156 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 TMEM150BA6NC51 233 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 CCDC182A6NF36 153 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 HIDE1A8MVS5 230 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 A8MXQ7 604 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 IDSB3KWA1 339 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 C5orf67F2Z3F1 127 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 PHF1O43189 567 aaPredicted RBP2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 LATO43561 262 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 CHMP2AO43633 222 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 LYPD3O95274 346 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 STSP08842 583 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 MCF2P10911 925 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 ETS2P15036 469 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 CHMLP26374 656 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 CD1CP29017 333 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 SHC1P29353 583 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 CASP14P31944 242 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 GCKP35557 465 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 LEPP41159 167 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 KIR2DS2P43631 304 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 QARSP47897 775 aaKnown RBP2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 ATP5OP48047 213 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 STARP49675 285 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 HLCSP50747 726 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 SLC25A1P53007 311 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 PLK1P53350 603 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 PRRX1P54821 245 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 SLC8A3P57103 927 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 GBE1Q04446 702 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 BST2Q10589 180 aaKnown RBP2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 TRDNQ13061 729 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 SRSF5Q13243 272 aaKnown RBP2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 FCN2Q15485 313 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 HIGD2BQ4VC39 106 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 CARD17Q5XLA6 110 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 KRTAP7-1Q8IUC3 87 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 NRMQ8IXM6 262 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 OR2L13Q8N349 312 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 CATSPER1Q8NEC5 780 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 SPATA4Q8NEY3 305 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 OR2A12Q8NGT7 310 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 OR2L2Q8NH16 312 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 KCNG3Q8TAE7 436 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 RAB3IL1Q8TBN0 382 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 PAQR8Q8TEZ7 354 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 ST8SIA1Q92185 356 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 RAPGEF5Q92565 580 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 NUS1Q96E22 293 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 SEC22AQ96IW7 307 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 SERAC1Q96JX3 654 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 MCHR1Q99705 422 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 TRIM62Q9BVG3 475 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 NUP58Q9BVL2 599 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 REEP4Q9H6H4 257 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 MIEF1Q9NQG6 463 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 OR1A1Q9P1Q5 309 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 RSPH14Q9UHP6 348 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms