RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 SERPINB7O75635 380 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 RP2O75695 350 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 TGDSO95455 350 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 RAB36O95755 333 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 PTHP01270 115 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 BGLAPP02818 100 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 ADH4P08319 380 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 VIMP08670 466 aaKnown RBP5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 PPIAL4FP0DN26 164 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF250P15622 560 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 ITGA2P17301 1181 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 CFPP27918 469 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 HTR2AP28223 471 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 LSP1P33241 339 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 SRP14P37108 136 aaKnown RBP5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 GPR6P46095 362 aaPredicted RBP5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF133P52736 654 aaPredicted RBP5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 WDR4P57081 412 aaKnown RBP5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 RAB1AP62820 205 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 GALK2Q01415 458 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 TEKQ02763 1124 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 PUDPQ08623 228 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 CAMK2DQ13557 499 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 TRIP10Q15642 601 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 HIST3H3Q16695 136 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 PHYHD1Q5SRE7 291 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 REEP3Q6NUK4 255 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF613Q6PF04 617 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 BLOC1S3Q6QNY0 202 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 VHLLQ6RSH7 139 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF813Q6ZN06 617 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 CDK20Q8IZL9 346 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 KDM8Q8N371 416 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 GOLGA6L1Q8N7Z2 621 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 OR51F2Q8NH61 342 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 OR6X1Q8NH79 312 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 CLDND2Q8NHS1 167 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF418Q8TF45 676 aaPredicted RBP5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 TMEM54Q969K7 222 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 VPS33AQ96AX1 596 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF837Q96EG3 531 aaPredicted RBP5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 SNX18Q96RF0 628 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF607Q96SK3 696 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 SEPHS2Q99611 448 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 FOXB1Q99853 325 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF426Q9BUY5 554 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 RBM4Q9BWF3 364 aaKnown RBP5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 ASPNQ9BXN1 380 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 RSPO3Q9BXY4 272 aaPredicted RBP5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 SLC19A3Q9BZV2 496 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 PCDHAC1Q9H158 963 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 SEC61A2Q9H9S3 476 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 TMEM27Q9HBJ8 222 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 SLC52A3Q9NQ40 469 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 TCF7L2Q9NQB0 619 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 SLCO1C1Q9NYB5 712 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 CGGBP1Q9UFW8 167 aaPredicted RBP5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 NBEAL1Q6ZS30 2694 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 TMEM120BA0PK00 339 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 HTR3EA5X5Y0 456 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 NPIPB13A6NJU9 1138 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF726A6NNF4 738 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 C17orf100A8MU93 164 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 C5orf58C9J3I9 102 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 NPIPB4C9JG80 1138 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 H3BSA7 217 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 TRIM77I1YAP6 450 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 M0R3G1 203 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 PLPP3O14495 311 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 CHP2O43745 196 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 MFN2O95140 757 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 FARS2O95363 451 aaKnown RBP5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 PNPP00491 289 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 HPRP00739 348 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 IGHV3-13P01766 116 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 HPXP02790 462 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 NUDT7P0C024 238 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 TSPAN19P0C672 248 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 OR8G3PP0DMU2 310 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 GAAP10253 952 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 SAGP10523 405 aaPredicted RBP5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 NQO1P15559 274 aaKnown RBP5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 TUBG1P23258 451 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 CPT2P23786 658 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 COL8A2P25067 703 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 LIPAP38571 399 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 CRYBB2P43320 205 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 RAD52P43351 418 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 GIPRP48546 466 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 NME5P56597 212 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 PCBP3P57721 371 aaKnown RBP5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 SELENOVP59797 346 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 NCALDP61601 193 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 LMO4P61968 165 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 TUBA1BP68363 451 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 TUBA4AP68366 448 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 CDK6Q00534 326 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 MYBPC1Q00872 1141 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 IL1RL1Q01638 556 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 RUNX1T1Q06455 604 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms