RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 IGHMP01871 453 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 F13BP05160 661 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 RAB40ALP0C0E4 278 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 ANKRD34CP0C6C1 535 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 S100A1P23297 94 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 PSMB10P40306 273 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 CXCL12P48061 93 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 NKX2-5P52952 324 aaPredicted RBP10.86□□□□□ -0.67
NUP54-202ENST00000502850 RAG2P55895 527 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 LTBQ06643 244 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 DYRK1AQ13627 763 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 CDK10Q15131 360 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 NTRK2Q16620 822 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 PLA1AQ53H76 456 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 VWA2Q5GFL6 755 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 TMEM71Q6P5X7 295 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 Q8N9G6 341 aaPredicted RBP10.86□□□□□ -0.67
NUP54-202ENST00000502850 ZNRF4Q8WWF5 429 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 RAB40AQ8WXH6 277 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 RNF31Q96EP0 1072 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 PDCD1LG2Q9BQ51 273 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 ACTR6Q9GZN1 396 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 TP63Q9H3D4 680 aaPredicted RBP10.86□□□□□ -0.67
NUP54-202ENST00000502850 SLA2Q9H6Q3 261 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 TCF7L1Q9HCS4 588 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 TAS2R10Q9NYW0 307 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 FBXO4Q9UKT5 387 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 V9GY05 133 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 PCDH15Q96QU1 1955 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 IGLV3-12A0A075B6K2 115 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 TMED7-TICAM2A0A0A6YYA0 188 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 IFITM5A6NNB3 132 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 CENPBD1B2RD01 187 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 SUSD5O60279 629 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 FADS1O60427 444 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 ZFPL1O95159 310 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 PAHP00439 452 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 CYC1P08574 325 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 SNRPBP14678 240 aaKnown RBP10.85□□□□□ -0.67
NUP54-202ENST00000502850 BCKDHBP21953 392 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 CFHR1Q03591 330 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 MAB21L1Q13394 359 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 SQSTM1Q13501 440 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 ZNF528Q3MIS6 628 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 CCDC92Q53HC0 331 aaPredicted RBP10.85□□□□□ -0.67
NUP54-202ENST00000502850 C1orf189Q5VU69 101 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 TMEM53Q6P2H8 277 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 MARCH3Q86UD3 253 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 GHDCQ8N2G8 530 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 SLC25A45Q8N413 288 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 ZNF511Q8NB15 262 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 OR6N2Q8NGY6 317 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 ZNF417Q8TAU3 575 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 NUBPLQ8TB37 319 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 LGALS14Q8TCE9 139 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 SMIM4Q8WVI0 70 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 ST8SIA1Q92185 356 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 ABHD1Q96SE0 405 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 ELF4Q99607 663 aaPredicted RBP10.85□□□□□ -0.67
NUP54-202ENST00000502850 SEMA4CQ9C0C4 833 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 EMC3Q9P0I2 261 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 MRM2Q9UI43 246 aaKnown RBP10.85□□□□□ -0.67
NUP54-202ENST00000502850 IKZF2Q9UKS7 526 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 ZNF346Q9UL40 294 aaKnown RBP10.85□□□□□ -0.67
NUP54-202ENST00000502850 TMED7Q9Y3B3 224 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 AK6Q9Y3D8 172 aaKnown RBP10.85□□□□□ -0.67
NUP54-202ENST00000502850 PCDHGA9Q9Y5G4 932 aaKnown RBP10.85□□□□□ -0.67
NUP54-202ENST00000502850 EML5Q05BV3 1969 aa10.85□□□□□ -0.67
NUP54-202ENST00000502850 TRBV5-5A0A0J9YX44 114 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 NAP1L6A6NFF2 107 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 A6NIZ1 184 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 A8MU76 341 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 MAGEB4O15481 346 aaPredicted RBP10.84□□□□□ -0.67
NUP54-202ENST00000502850 NPIPB7O75200 414 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 ZNF254O75437 659 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 UPK3AO75631 287 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 LDOC1O95751 146 aaPredicted RBP10.84□□□□□ -0.67
NUP54-202ENST00000502850 ABHD16AO95870 558 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 C1QBP02746 253 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 OR8G3PP0DMU2 310 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 NAGAP17050 411 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 ALOX5APP20292 161 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 HOXD12P35452 270 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 MAP2K6P52564 334 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 RAP1BP61224 184 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 RPL27P61353 136 aaKnown RBP10.84□□□□□ -0.67
NUP54-202ENST00000502850 RAP1AP62834 184 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 C1orf140Q5VVS0 124 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 LIPNQ5VXI9 398 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 FAM205BPQ63HN1 556 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 FDX2Q6P4F2 183 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 DNM1P34Q6PK57 102 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 ASB18Q6ZVZ8 466 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 KRT74Q7RTS7 529 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 ASCC1Q8N9N2 400 aaKnown RBP10.84□□□□□ -0.67
NUP54-202ENST00000502850 OR5H6Q8NGV6 325 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 GPR148Q8TDV2 347 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 NSMAFQ92636 917 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 YIPF5Q969M3 257 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 CCDC74AQ96AQ1 378 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms