RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 LPAR4Q99677 370 aa11.83□□□□□ -0.51
PTPN7-217ENST00000495688 ZNF224Q9NZL3 707 aa11.83□□□□□ -0.51
PTPN7-217ENST00000495688 AKAP7Q9P0M2 348 aaPredicted RBP11.83□□□□□ -0.51
PTPN7-217ENST00000495688 MEIS3P1A6NDR6 274 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 PYCARD-AS1I3L0S3 204 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 AKR7A3O95154 331 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 WISP1O95388 367 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 SIX6O95475 246 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 ABHD16AO95870 558 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 TNFP01375 233 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 CD14P08571 375 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 FBXO45P0C2W1 286 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 EFNB2P52799 333 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 OPCMLQ14982 345 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 AANATQ16613 207 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 KLHL26Q53HC5 615 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 MESTQ5EB52 335 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 SLC16A9Q7RTY1 509 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 LRRTM1Q86UE6 522 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 LRRC75AQ8NAA5 344 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 ATOH1Q92858 354 aaPredicted RBP11.83□□□□□ -0.52
PTPN7-217ENST00000495688 TMEM106AQ96A25 262 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 SFXN2Q96NB2 322 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 PCNX3Q9H6A9 2034 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 MMP25Q9NPA2 562 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 HIF3AQ9Y2N7 669 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 SPEF1Q9Y4P9 236 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 SDK1Q7Z5N4 2213 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 B4DGG1 531 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 AKT2P31751 481 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 AP3S2P59780 193 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 PSMA6P60900 246 aaKnown RBP11.83□□□□□ -0.52
PTPN7-217ENST00000495688 GUCA2AQ02747 115 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 RPL18Q07020 188 aaKnown RBP11.83□□□□□ -0.52
PTPN7-217ENST00000495688 IKZF1Q13422 519 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 HTR4Q13639 388 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 GRM7Q14831 915 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 C2orf68Q2NKX9 166 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 ELFN2Q5R3F8 820 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 SFRP5Q5T4F7 317 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 FAM220AQ7Z4H9 259 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.83□□□□□ -0.52
PTPN7-217ENST00000495688 ATG4DQ86TL0 474 aaPredicted RBP11.83□□□□□ -0.52
PTPN7-217ENST00000495688 ZNF615Q8N8J6 731 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 C19orf47Q8N9M1 422 aaKnown RBP11.83□□□□□ -0.52
PTPN7-217ENST00000495688 CCDC74AQ96AQ1 378 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 GPX7Q96SL4 187 aaPredicted RBP11.83□□□□□ -0.52
PTPN7-217ENST00000495688 RTN4RQ9BZR6 473 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 SEMA6CQ9H3T2 930 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 ZNF275Q9NSD4 429 aaPredicted RBP11.83□□□□□ -0.52
PTPN7-217ENST00000495688 KCNN3Q9UGI6 736 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 POMT2Q9UKY4 750 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 SCML1Q9UN30 329 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 MAB21L2Q9Y586 359 aa11.83□□□□□ -0.52
PTPN7-217ENST00000495688 A0A1W2PPL8 197 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 TCRBV21S2A2A0A5A6 115 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 PRAF2O60831 178 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 IFI6P09912 130 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 EN2P19622 333 aaPredicted RBP11.82□□□□□ -0.52
PTPN7-217ENST00000495688 SDHAP31040 664 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 DLX2Q07687 328 aaPredicted RBP11.82□□□□□ -0.52
PTPN7-217ENST00000495688 EIF2B5Q13144 721 aaKnown RBP11.82□□□□□ -0.52
PTPN7-217ENST00000495688 IL10RAQ13651 578 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 TMEM65Q6PI78 240 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 FBXO46Q6PJ61 603 aaPredicted RBP11.82□□□□□ -0.52
PTPN7-217ENST00000495688 BIVMQ86UB2 503 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 UXS1Q8NBZ7 420 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 FAM71CQ8NEG0 241 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 MRPL48Q96GC5 212 aaKnown RBP11.82□□□□□ -0.52
PTPN7-217ENST00000495688 TSPAN32Q96QS1 320 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 GSX2Q9BZM3 304 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 SYT4Q9H2B2 425 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 EVA1AQ9H8M9 152 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 DZANK1Q9NVP4 752 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 LAMP5Q9UJQ1 280 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 COL4A2P08572 1712 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 PLSCR5A0PG75 271 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 ANXA2P2A6NMY6 339 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 ACOT7O00154 380 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 CLPSP04118 112 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 ANXA2P07355 339 aaKnown RBP11.82□□□□□ -0.52
PTPN7-217ENST00000495688 TACSTD2P09758 323 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 RAB40ALP0C0E4 278 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 VSIG10L2P0DP72 767 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 CALCBP10092 127 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 RRASP10301 218 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 HPGDP15428 266 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 MAOBP27338 520 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 PRTGQ2VWP7 1150 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 PCGF3Q3KNV8 242 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 C1QL3Q5VWW1 255 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 OLFML2AQ68BL7 652 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 SLC6A19Q695T7 634 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 ARMC6Q6NXE6 501 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 IDO2Q6ZQW0 420 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 CDH24Q86UP0 819 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 PRR22Q8IZ63 422 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 PRSS35Q8N3Z0 413 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 ZNF676Q8N7Q3 588 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 OR51D1Q8NGF3 324 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms