RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 MNAT1P51948 309 aa15.41■□□□□ 0.06
HDAC4-211ENST00000494800 UGT2B15P54855 530 aa15.41■□□□□ 0.06
HDAC4-211ENST00000494800 SPOCK1Q08629 439 aa15.41■□□□□ 0.06
HDAC4-211ENST00000494800 TRAM2Q15035 370 aa15.41■□□□□ 0.06
HDAC4-211ENST00000494800 ETFDHQ16134 617 aa15.41■□□□□ 0.06
HDAC4-211ENST00000494800 PGGHGQ32M88 737 aa15.41■□□□□ 0.06
HDAC4-211ENST00000494800 C3orf36Q3SXR2 165 aa15.41■□□□□ 0.06
HDAC4-211ENST00000494800 ZNF544Q6NX49 715 aa15.41■□□□□ 0.06
HDAC4-211ENST00000494800 SLC46A3Q7Z3Q1 461 aa15.41■□□□□ 0.06
HDAC4-211ENST00000494800 OFCC1Q8IZS5 231 aa15.41■□□□□ 0.06
HDAC4-211ENST00000494800 FAM169BQ8N8A8 192 aa15.41■□□□□ 0.06
HDAC4-211ENST00000494800 NANOS1Q8WY41 292 aaKnown RBP15.41■□□□□ 0.06
HDAC4-211ENST00000494800 HSH2DQ96JZ2 352 aa15.41■□□□□ 0.06
HDAC4-211ENST00000494800 KATNB1Q9BVA0 655 aa15.41■□□□□ 0.06
HDAC4-211ENST00000494800 GRIP2Q9C0E4 1043 aa15.41■□□□□ 0.06
HDAC4-211ENST00000494800 GMPR2Q9P2T1 348 aaKnown RBP15.41■□□□□ 0.06
HDAC4-211ENST00000494800 STX18Q9P2W9 335 aaKnown RBP15.41■□□□□ 0.06
HDAC4-211ENST00000494800 TAGLN3Q9UI15 199 aa15.41■□□□□ 0.06
HDAC4-211ENST00000494800 A4GNTQ9UNA3 340 aa15.41■□□□□ 0.06
HDAC4-211ENST00000494800 SAMD4AQ9UPU9 718 aaKnown RBP15.41■□□□□ 0.06
HDAC4-211ENST00000494800 HIVEP1P15822 2718 aa15.41■□□□□ 0.06
HDAC4-211ENST00000494800 F8P00451 2351 aa15.41■□□□□ 0.06
HDAC4-211ENST00000494800 TTKP33981 857 aa15.4■□□□□ 0.06
HDAC4-211ENST00000494800 ARR3P36575 388 aa15.4■□□□□ 0.06
HDAC4-211ENST00000494800 DAP3P51398 398 aaKnown RBP15.4■□□□□ 0.06
HDAC4-211ENST00000494800 MXRA7P84157 204 aa15.4■□□□□ 0.06
HDAC4-211ENST00000494800 GKAP1Q5VSY0 366 aaPredicted RBP15.4■□□□□ 0.06
HDAC4-211ENST00000494800 GLYATQ6IB77 296 aa15.4■□□□□ 0.06
HDAC4-211ENST00000494800 C16orf89Q6UX73 402 aa15.4■□□□□ 0.06
HDAC4-211ENST00000494800 DTX2Q86UW9 622 aa15.4■□□□□ 0.06
HDAC4-211ENST00000494800 CDK20Q8IZL9 346 aa15.4■□□□□ 0.06
HDAC4-211ENST00000494800 MUC15Q8N387 334 aa15.4■□□□□ 0.06
HDAC4-211ENST00000494800 SLC25A44Q96H78 314 aaPredicted RBP15.4■□□□□ 0.06
HDAC4-211ENST00000494800 BDH2Q9BUT1 245 aa15.4■□□□□ 0.06
HDAC4-211ENST00000494800 TRAF4Q9BUZ4 470 aaPredicted RBP15.4■□□□□ 0.06
HDAC4-211ENST00000494800 FAM32AQ9Y421 112 aaKnown RBP15.4■□□□□ 0.06
HDAC4-211ENST00000494800 PRRC2AP48634 2157 aaKnown RBP15.4■□□□□ 0.06
HDAC4-211ENST00000494800 ITPR3Q14573 2671 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 IGHV1-18A0A0C4DH31 117 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 E7EQL1 145 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 OVOL3O00110 214 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 IGHG1P01857 330 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 IFI30P13284 250 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 CBR1P16152 277 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 NCK1P16333 377 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 YAP1P46937 504 aaKnown RBP15.39■□□□□ 0.05
HDAC4-211ENST00000494800 CLRN1P58418 232 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 RPL18Q07020 188 aaKnown RBP15.39■□□□□ 0.05
HDAC4-211ENST00000494800 SAMD4BQ5PRF9 694 aaKnown RBP15.39■□□□□ 0.05
HDAC4-211ENST00000494800 PHYHD1Q5SRE7 291 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 NHLRC1Q6VVB1 395 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 ZNF813Q6ZN06 617 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 RRM2BQ7LG56 351 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 KRTAP1-3Q8IUG1 177 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 PGAM4Q8N0Y7 254 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 ANKS4BQ8N8V4 417 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 LIPHQ8WWY8 451 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 BPIFA2Q96DR5 249 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 C18orf12Q96KH6 178 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 Q96MF0 132 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 NELFAQ9H3P2 528 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 BARX1Q9HBU1 254 aaPredicted RBP15.39■□□□□ 0.05
HDAC4-211ENST00000494800 INIPQ9NRY2 104 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 CBLN4Q9NTU7 201 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 C20orf141Q9NUB4 165 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 GLTPQ9NZD2 209 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 CRNNQ9UBG3 495 aaPredicted RBP15.39■□□□□ 0.05
HDAC4-211ENST00000494800 EGFL7Q9UHF1 273 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 MOKQ9UQ07 419 aa15.39■□□□□ 0.05
HDAC4-211ENST00000494800 DSCAMO60469 2012 aa15.38■□□□□ 0.05
HDAC4-211ENST00000494800 ATP6V1G2-DDX39BF2Z307 99 aa15.38■□□□□ 0.05
HDAC4-211ENST00000494800 SAGP10523 405 aaPredicted RBP15.38■□□□□ 0.05
HDAC4-211ENST00000494800 NR2C1P13056 603 aa15.38■□□□□ 0.05
HDAC4-211ENST00000494800 APOBEC3AP31941 199 aaPredicted RBP15.38■□□□□ 0.05
HDAC4-211ENST00000494800 CDKN1AP38936 164 aa15.38■□□□□ 0.05
HDAC4-211ENST00000494800 TUBA1BP68363 451 aa15.38■□□□□ 0.05
HDAC4-211ENST00000494800 TUBA4AP68366 448 aa15.38■□□□□ 0.05
HDAC4-211ENST00000494800 CHRNB3Q05901 458 aa15.38■□□□□ 0.05
HDAC4-211ENST00000494800 MELKQ14680 651 aa15.38■□□□□ 0.05
HDAC4-211ENST00000494800 ZNF730Q6ZMV8 503 aa15.38■□□□□ 0.05
HDAC4-211ENST00000494800 TUBA1AQ71U36 451 aa15.38■□□□□ 0.05
HDAC4-211ENST00000494800 RNF113BQ8IZP6 322 aaKnown RBP15.38■□□□□ 0.05
HDAC4-211ENST00000494800 IL17RDQ8NFM7 739 aa15.38■□□□□ 0.05
HDAC4-211ENST00000494800 TMEM54Q969K7 222 aa15.38■□□□□ 0.05
HDAC4-211ENST00000494800 ZNF837Q96EG3 531 aaPredicted RBP15.38■□□□□ 0.05
HDAC4-211ENST00000494800 CCT8L2Q96SF2 557 aa15.38■□□□□ 0.05
HDAC4-211ENST00000494800 FOXB1Q99853 325 aa15.38■□□□□ 0.05
HDAC4-211ENST00000494800 RHCGQ9UBD6 479 aa15.38■□□□□ 0.05
HDAC4-211ENST00000494800 MAGEL2Q9UJ55 1249 aa15.38■□□□□ 0.05
HDAC4-211ENST00000494800 FAM171A2A8MVW0 826 aa15.37■□□□□ 0.05
HDAC4-211ENST00000494800 VSTM5A8MXK1 200 aa15.37■□□□□ 0.05
HDAC4-211ENST00000494800 CENPBD1B2RD01 187 aa15.37■□□□□ 0.05
HDAC4-211ENST00000494800 SEC14L2O76054 403 aa15.37■□□□□ 0.05
HDAC4-211ENST00000494800 FARS2O95363 451 aaKnown RBP15.37■□□□□ 0.05
HDAC4-211ENST00000494800 IGKV3-15P01624 115 aa15.37■□□□□ 0.05
HDAC4-211ENST00000494800 F13BP05160 661 aa15.37■□□□□ 0.05
HDAC4-211ENST00000494800 CD79AP11912 226 aa15.37■□□□□ 0.05
HDAC4-211ENST00000494800 AQP2P41181 271 aa15.37■□□□□ 0.05
HDAC4-211ENST00000494800 KRT72Q14CN4 511 aa15.37■□□□□ 0.05
HDAC4-211ENST00000494800 GSG1Q2KHT4 349 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms