RNA–Protein interactions for RNA: ENST00000494414.1

GPATCH4-207, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-207ENST00000494414 LHX2P50458 406 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 CRYBA2P53672 197 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 DSCR4P56555 118 aaPredicted RBP7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 CLDN15P56746 228 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 CLDN18P56856 261 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 PPP3R1P63098 170 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 POU6F2P78424 691 aaPredicted RBP7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 MRPS15P82914 257 aaKnown RBP7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 RAB40BQ12829 278 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 TAB1Q15750 504 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 CD226Q15762 336 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 ZNF141Q15928 474 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 ARHGAP11BQ3KRB8 267 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 ZFP69Q49AA0 526 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 KLHL26Q53HC5 615 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 EIPR1Q53HC9 387 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 DCST2Q5T1A1 773 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 C1orf185Q5T7R7 199 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 RIPPLY2Q5TAB7 128 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 DDI2Q5TDH0 399 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 RRM2BQ7LG56 351 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 C6orf120Q7Z4R8 191 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 MISPQ8IVT2 679 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 COX18Q8N8Q8 333 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 TOR1AIP2Q8NFQ8 470 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 OR9Q2Q8NGE9 314 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 MBD3L2Q8NHZ7 208 aaPredicted RBP7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 GNPDA2Q8TDQ7 276 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 GPR151Q8TDV0 419 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 CAPSLQ8WWF8 208 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 RFKQ969G6 155 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 ARSGQ96EG1 525 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 C1GALT1C1Q96EU7 318 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 SLC35G5Q96KT7 338 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 SDF2Q99470 211 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 TIMP4Q99727 224 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 KCNS3Q9BQ31 491 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 KLHDC3Q9BQ90 382 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 RHNO1Q9BSD3 238 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 SLA2Q9H6Q3 261 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 POLE4Q9NR33 117 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 POLE3Q9NRF9 147 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 DDX28Q9NUL7 540 aaKnown RBP7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 MRPS18AQ9NVS2 196 aaKnown RBP7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 RLIMQ9NVW2 624 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 NDUFB11Q9NX14 153 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 KLRF1Q9NZS2 232 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 CLCF1Q9UBD9 225 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 PLEKHB1Q9UF11 243 aaPredicted RBP7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 KCNE5Q9UJ90 142 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 SNX8Q9Y5X2 465 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 PDZD2O15018 2839 aa7.56□□□□□ -1.2
GPATCH4-207ENST00000494414 ANKHD1Q8IWZ3 2542 aaKnown RBP7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 A0A0G2JPF8 293 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 CENPVL1A0A0U1RR11 272 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 A0A1W2PRQ8 180 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 TMEM129A0AVI4 362 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 FAM181BA6NEQ2 426 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 FABP12A6NFH5 140 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 CD8B2A6NJW9 211 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 KDM4EB2RXH2 506 aaPredicted RBP7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 HNRNPCL2B2RXH8 293 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 HNRNPCL3B7ZW38 293 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 HMGN4O00479 90 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 OIP5O43482 229 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 CDC40O60508 579 aaKnown RBP eCLIP7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 ENTPD6O75354 484 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 GPX5O75715 221 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 BCHEP06276 602 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 TPOP07202 933 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 YES1P07947 543 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 HNRNPCL4P0DMR1 293 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 GLI4P10075 376 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 NR2F1P10589 423 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 POU2F1P14859 743 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 GABRA1P14867 456 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 CPEP16870 476 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 HTR3AP46098 478 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 CAPZA2P47755 286 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 CRISP3P54108 245 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 ATP12AP54707 1039 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 SUMO3P55854 103 aaPredicted RBP7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 C17orf67Q0P5P2 114 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 ASAH1Q13510 395 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 TP53BP2Q13625 1128 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 QPRTQ15274 297 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 SEC23BQ15437 767 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 GUSBP1Q15486 140 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 PLPPR5Q32ZL2 321 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 FBXL19-AS1Q494R0 122 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 GXYLT1Q4G148 440 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 SLC25A53Q5H9E4 307 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 WIPI1Q5MNZ9 446 aaPredicted RBP7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 CCNJQ5T5M9 372 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 LCN1P1Q5VSP4 162 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 NSUN5P2Q63ZY6 315 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 TYW3Q6IPR3 259 aaKnown RBP7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 ZNF770Q6IQ21 691 aaPredicted RBP7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 FAM131AQ6UXB0 335 aa7.55□□□□□ -1.2
GPATCH4-207ENST00000494414 FRRS1Q6ZNA5 592 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms