RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 TEX101Q9BY14 249 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 PARP12Q9H0J9 701 aaKnown RBP6.3□□□□□ -1.4
VPS13B-205ENST00000493587 KCNG2Q9UJ96 466 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 AKT3Q9Y243 479 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 GPR52Q9Y2T5 361 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 A0A1W2PPC1 479 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 A0A1W2PQ45 241 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-205ENST00000493587 A0A1W2PQY0 241 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 MEIS3P2A8K0S8 358 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 M0QZ24 198 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 GEMIN2O14893 280 aaKnown RBP6.3□□□□□ -1.4
VPS13B-205ENST00000493587 DOK2O60496 412 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 HIST1H2BKO60814 126 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 PLXNA2O75051 1894 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 IFNA6P05013 189 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 HIST1H2BJP06899 126 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 HIST1H2BOP23527 126 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 CHRNB4P30926 498 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 DCTDP32321 178 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 HIST1H2BBP33778 126 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 RENBPP51606 427 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 CCL23P55773 120 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 HIST1H2BDP58876 126 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 ERVPABLB-1P60509 514 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 RPS14P62263 151 aaKnown RBP6.3□□□□□ -1.4
VPS13B-205ENST00000493587 HIST1H2BCP62807 126 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 PAX5Q02548 391 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 JOSD1Q15040 202 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-205ENST00000493587 SURF1Q15526 300 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 HIST2H2BEQ16778 126 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 SLC25A35Q3KQZ1 300 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-205ENST00000493587 COL5A1-AS1Q5SY13 56 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 C12orf76Q8N812 135 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-205ENST00000493587 NUDCD2Q8WVJ2 157 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 HIST1H2BHQ93079 126 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 KCTD12Q96CX2 325 aaKnown RBP6.3□□□□□ -1.4
VPS13B-205ENST00000493587 HHIPL1Q96JK4 782 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 UBL7Q96S82 380 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-205ENST00000493587 CNN2Q99439 309 aaKnown RBP6.3□□□□□ -1.4
VPS13B-205ENST00000493587 HIST1H2BNQ99877 126 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 HIST1H2BMQ99879 126 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 COMMD4Q9H0A8 199 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 ARV1Q9H2C2 271 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 TMEM30AQ9NV96 361 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 UPB1Q9UBR1 384 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 PADI1Q9ULC6 663 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 EXOSC1Q9Y3B2 195 aaKnown RBP6.3□□□□□ -1.4
VPS13B-205ENST00000493587 AQP7P3A6NL99 342 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 MAGEB17A8MXT2 336 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 H0YIV9 168 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 MFNGO00587 321 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 KCNAB3O43448 404 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 RPP14O95059 124 aaKnown RBP6.3□□□□□ -1.4
VPS13B-205ENST00000493587 TSPAN15O95858 294 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 CHRM4P08173 479 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 OR13C7P0DN81 318 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 PTHLHP12272 177 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 HSD3B1P14060 373 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 ST6GAL1P15907 406 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 SERPINA2P20848 420 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 EPHA1P21709 976 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 GALP22466 123 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 PMELP40967 661 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 WNT5AP41221 380 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 TNFSF10P50591 281 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 SLC37A1P57057 533 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 LSM11P83369 360 aaKnown RBP eCLIP6.3□□□□□ -1.4
VPS13B-205ENST00000493587 ZXDBP98169 803 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 DNLZQ5SXM8 178 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 ZNF836Q6ZNA1 936 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 C17orf64Q86WR6 236 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 CATSPERDQ86XM0 798 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 ZNF573Q86YE8 665 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 GABRG1Q8N1C3 465 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 KDM8Q8N371 416 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 OR5L2Q8NGL0 311 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 SMIM4Q8WVI0 70 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 SPRYD4Q8WW59 207 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-205ENST00000493587 TOMM40LQ969M1 308 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 SMARCD1Q96GM5 515 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 ORAI3Q9BRQ5 295 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 POTEKPQ9BYX7 375 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 SYT4Q9H2B2 425 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 NELFAQ9H3P2 528 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 GKN1Q9NS71 199 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 MRPL22Q9NWU5 206 aaKnown RBP6.3□□□□□ -1.4
VPS13B-205ENST00000493587 SLC23A2Q9UGH3 650 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 TCFL5Q9UL49 500 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 SLC7A11Q9UPY5 501 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 NUP205Q92621 2012 aa6.3□□□□□ -1.4
VPS13B-205ENST00000493587 CCDC187A0A096LP49 1063 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 TBC1D3BA6NDS4 549 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 DHRS7CA6NNS2 312 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 FAM171A2A8MVW0 826 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 EEF1E1-BLOC1S5C9J1V9 151 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 H7C4K7 107 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 ZNF264O43296 627 aa6.29□□□□□ -1.4
VPS13B-205ENST00000493587 EIF4E2O60573 245 aaKnown RBP6.29□□□□□ -1.4
VPS13B-205ENST00000493587 FBXO24O75426 580 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms