RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ADAM30Q9UKF2 790 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 BOKQ9UMX3 212 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-219ENST00000491747 A4GNTQ9UNA3 340 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 SLC5A6Q9Y289 635 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 SLC9A8Q9Y2E8 581 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 EXOSC1Q9Y3B2 195 aaKnown RBP8.49□□□□□ -1.05
BRCA1-219ENST00000491747 SF3B6Q9Y3B4 125 aaKnown RBP8.49□□□□□ -1.05
BRCA1-219ENST00000491747 ALG5Q9Y673 324 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 RP1L1Q8IWN7 2480 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-219ENST00000491747 WIPF3A6NGB9 483 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 FADS1O60427 444 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 CRYZL1O95825 349 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 CA7P43166 264 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 MTNR1AP48039 350 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 RFX3P48380 749 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 MAN2A2P49641 1150 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 CLDN20P56880 219 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 PRR5P85299 388 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 CDK5Q00535 292 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 MAB21L1Q13394 359 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 PIN1Q13526 163 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-219ENST00000491747 IL18Q14116 193 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 SLC10A1Q14973 349 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 ZNHIT3Q15649 155 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-219ENST00000491747 EMC4Q5J8M3 183 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 CCNJQ5T5M9 372 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 SLC30A6Q6NXT4 461 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 MZT2AQ6P582 158 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 PODNL1Q6PEZ8 512 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 FIGNL1Q6PIW4 674 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 CD200R1LQ6Q8B3 271 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 APOOLQ6UXV4 268 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 C3P1Q6ZMU1 363 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 TRILQ7L0X0 811 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 C6orf120Q7Z4R8 191 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 DOLPP1Q86YN1 238 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 RBM45Q8IUH3 476 aaKnown RBP8.48□□□□□ -1.05
BRCA1-219ENST00000491747 SYT14Q8NB59 555 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 OR4K5Q8NGD3 323 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 DEDD2Q8WXF8 326 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 GATAD2BQ8WXI9 593 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 CDS1Q92903 461 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 RAB8BQ92930 207 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 SNAPC3Q92966 411 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 RELTQ969Z4 430 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 RNFT2Q96EX2 444 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 TM9SF2Q99805 663 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 TREX2Q9BQ50 279 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-219ENST00000491747 MARVELD1Q9BSK0 173 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 PRRG3Q9BZD7 231 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 SLC6A15Q9H2J7 730 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 KLRF1Q9NZS2 232 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 P2RX2Q9UBL9 471 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 CARD8Q9Y2G2 431 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 A0A1B0GVC2 190 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 TRDV1A0A1B0GX56 115 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 SMIM30A4D0T7 59 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 HMGN4O00479 90 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 SLC43A1O75387 559 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 GDF1P27539 372 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 PTGS2P35354 604 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 RRAS2P62070 204 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-219ENST00000491747 EFNB1P98172 346 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 FABP5Q01469 135 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 RBPJQ06330 500 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 SNTA1Q13424 505 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 RIN1Q13671 783 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 DECR1Q16698 335 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 FLYWCH1Q4VC44 716 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 OR5M10Q6IEU7 315 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 ACSM5Q6NUN0 579 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 CDC73Q6P1J9 531 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 C1orf94Q6P1W5 598 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 ZCCHC12Q6PEW1 402 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 ZER1Q7Z7L7 766 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 OR4D11Q8NGI4 311 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 OR5D16Q8NGK9 328 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 OR1J4Q8NGS1 313 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 TEX47Q8TBZ9 253 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 SUN5Q8TC36 379 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 SFXN5Q8TD22 340 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 SLC38A2Q96QD8 506 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 CITED4Q96RK1 184 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 SOSTQ9BQB4 213 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 SPATA5L1Q9BVQ7 753 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 SPRR3Q9UBC9 169 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 NLKQ9UBE8 527 aa8.48□□□□□ -1.05
BRCA1-219ENST00000491747 MYO7BQ6PIF6 2116 aa8.47□□□□□ -1.05
BRCA1-219ENST00000491747 UTS2O95399 124 aa8.47□□□□□ -1.05
BRCA1-219ENST00000491747 HLA-DPB1P04440 258 aa8.47□□□□□ -1.05
BRCA1-219ENST00000491747 GAAP10253 952 aa8.47□□□□□ -1.05
BRCA1-219ENST00000491747 ABOP16442 354 aa8.47□□□□□ -1.05
BRCA1-219ENST00000491747 EVI2BP34910 448 aa8.47□□□□□ -1.05
BRCA1-219ENST00000491747 EVX1P49640 407 aa8.47□□□□□ -1.05
BRCA1-219ENST00000491747 MRPL28Q13084 256 aaKnown RBP8.47□□□□□ -1.05
BRCA1-219ENST00000491747 MADCAM1Q13477 382 aa8.47□□□□□ -1.05
BRCA1-219ENST00000491747 ENTPD8Q5MY95 495 aa8.47□□□□□ -1.05
BRCA1-219ENST00000491747 SLC27A4Q6P1M0 643 aa8.47□□□□□ -1.05
BRCA1-219ENST00000491747 OR56A1Q8NGH5 318 aa8.47□□□□□ -1.05
BRCA1-219ENST00000491747 OR4C3Q8NH37 302 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms