RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 SIGLEC7Q9Y286 467 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 ADAM18Q9Y3Q7 739 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 AP4S1Q9Y587 144 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 ZNF726A6NNF4 738 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 ZNF587BE7ETH6 402 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 C16orf97H3BN30 126 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 H3BNX3 289 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 H7C1C5 153 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 M0R3G1 203 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 PDLIM1O00151 329 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 ENTPD5O75356 428 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 DEAF1O75398 565 aaPredicted RBP9.73□□□□□ -0.85
UBE4B-210ENST00000488228 KRT33AO76009 404 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 SEC14L2O76054 403 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 SOX14O95416 240 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 BCL10O95999 233 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 IGHMP01871 453 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 CDH2P19022 906 aaPredicted RBP9.73□□□□□ -0.85
UBE4B-210ENST00000488228 PSMB1P20618 241 aaKnown RBP9.73□□□□□ -0.85
UBE4B-210ENST00000488228 IL32P24001 234 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 IFNGR2P38484 337 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 CSNK1A1P48729 337 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 DAP3P51398 398 aaKnown RBP9.73□□□□□ -0.85
UBE4B-210ENST00000488228 CTXN1P60606 82 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 LCN6P62502 163 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 ERVK-25P63136 954 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 ATP6AP1Q15904 470 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 MICAQ29983 383 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 SFRP5Q5T4F7 317 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 SP5Q6BEB4 398 aaPredicted RBP9.73□□□□□ -0.85
UBE4B-210ENST00000488228 HMBOX1Q6NT76 420 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 C1orf94Q6P1W5 598 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 ZNF620Q6ZNG0 422 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 C22orf34Q6ZV56 151 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 BHLHA15Q7RTS1 189 aaPredicted RBP9.73□□□□□ -0.85
UBE4B-210ENST00000488228 KIF18BQ86Y91 864 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 C20orf196Q8IYI0 205 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 GPR137CQ8N3F9 429 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 CLDN22Q8N7P3 220 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 POMGNT2Q8NAT1 580 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 NOXO1Q8NFA2 376 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 GNPDA2Q8TDQ7 276 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 GIPC3Q8TF64 312 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 LRTOMTQ8WZ04 291 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 ZNF837Q96EG3 531 aaPredicted RBP9.73□□□□□ -0.85
UBE4B-210ENST00000488228 ZC3HAV1LQ96H79 300 aaKnown RBP9.73□□□□□ -0.85
UBE4B-210ENST00000488228 OR52D1Q9H346 318 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 EGLN3Q9H6Z9 239 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 ARMC1Q9NVT9 282 aa9.73□□□□□ -0.85
UBE4B-210ENST00000488228 PDP1Q9P0J1 537 aaPredicted RBP9.73□□□□□ -0.85
UBE4B-210ENST00000488228 MAGED1Q9Y5V3 778 aaPredicted RBP9.73□□□□□ -0.85
UBE4B-210ENST00000488228 FBN2P35556 2912 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 ITPR2Q14571 2701 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 SH3D21A4FU49 640 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 TUBAL3A6NHL2 446 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 PTP4A3O75365 173 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 NDUFB2O95178 105 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 CNOT4O95628 575 aaKnown RBP9.72□□□□□ -0.85
UBE4B-210ENST00000488228 PPP1R3DO95685 299 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 GASTP01350 101 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 IGHG1P01857 330 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 IGFBP1P08833 259 aaPredicted RBP9.72□□□□□ -0.85
UBE4B-210ENST00000488228 PGA4P0DJD7 388 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 PGA3P0DJD8 388 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 KIR2DL3P43628 341 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 PRPS1P60891 318 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 ROR2Q01974 943 aaKnown RBP9.72□□□□□ -0.85
UBE4B-210ENST00000488228 FMODQ06828 376 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 TSPAN31Q12999 210 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 ITGADQ13349 1161 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 P2RY6Q15077 328 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 STK11Q15831 433 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 ANKDD1AQ495B1 522 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 ARMC4Q5T2S8 1044 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 ALKBH2Q6NS38 261 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 SMARCD3Q6STE5 483 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 AMIGO2Q86SJ2 522 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 ZNF433Q8N7K0 673 aaPredicted RBP9.72□□□□□ -0.85
UBE4B-210ENST00000488228 SYT14Q8NB59 555 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 OR8D4Q8NGM9 314 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 OR6N1Q8NGY5 312 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 OR6X1Q8NH79 312 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 HDAC2Q92769 488 aaKnown RBP9.72□□□□□ -0.85
UBE4B-210ENST00000488228 ZNF566Q969W8 418 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 RASD2Q96D21 266 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 SLC25A44Q96H78 314 aaPredicted RBP9.72□□□□□ -0.85
UBE4B-210ENST00000488228 SAMD8Q96LT4 415 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 Q96M85 177 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 ADAD1Q96M93 576 aaKnown RBP9.72□□□□□ -0.85
UBE4B-210ENST00000488228 FEVQ99581 238 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 NIPSNAP1Q9BPW8 284 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 SPOCK3Q9BQ16 436 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 MED18Q9BUE0 208 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 PLA2G12AQ9BZM1 189 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 ULBP2Q9BZM5 246 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 LINC00470Q9BZP3 86 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 NDEL1Q9GZM8 345 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 SEMA6AQ9H2E6 1030 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 TXNIPQ9H3M7 391 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 GPR35Q9HC97 309 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms