RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 COX5AP20674 150 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 ANXA13P27216 316 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 NTSP30990 170 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 RDXP35241 583 aaKnown RBP3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 RPL13AP40429 203 aaKnown RBP3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 MAP3K8P41279 467 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 MAGEA8P43361 318 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 CEBPDP49716 269 aaPredicted RBP3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 SULT1E1P49888 294 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 SLC26A2P50443 739 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 PLK1P53350 603 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 KRTAP10-6P60371 365 aaPredicted RBP3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 BEX3Q00994 111 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 ISXQ2M1V0 245 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 CCDC183Q5T5S1 534 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 ACOT7LQ6ZUV0 252 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 HSD17B13Q7Z5P4 300 aaPredicted RBP3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 ZNF589Q86UQ0 364 aaPredicted RBP3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 CCDC65Q8IXS2 484 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 FBXL16Q8N461 479 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 C11orf42Q8N5U0 333 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 NEIL2Q969S2 332 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 PGLYRP4Q96LB8 373 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 CNOT6LQ96LI5 555 aaKnown RBP3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 GAL3ST1Q99999 423 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 MAPKAP1Q9BPZ7 522 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 KLHDC3Q9BQ90 382 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 CNPY3Q9BT09 278 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 PARD6BQ9BYG5 372 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 GCOM2Q9BZD3 368 aaPredicted RBP3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 EHD1Q9H4M9 534 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 ISG20L2Q9H9L3 353 aaKnown RBP3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 FN3KRPQ9HA64 309 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 HOXC10Q9NYD6 342 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 PLXNA4Q9HCM2 1894 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 ZFP92A6NM28 416 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 IDSB3KWA1 339 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 E7ENQ6 273 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 NBR2O15453 112 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 ZNF264O43296 627 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 PRKAB2O43741 272 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 FLOT1O75955 427 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 DIRAS1O95057 198 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 SLC25A27O95847 323 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 IGKV3-15P01624 115 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 LGALS2P05162 132 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 ZBTB25P24278 435 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 GNA11P29992 359 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 DYNLL1P63167 89 aaKnown RBP3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 EGFEM1PQ0D2K5 195 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 KLRB1Q12918 225 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 PRR30Q53SZ7 412 aaPredicted RBP3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 DMRTC1Q5HYR2 192 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 C1orf220Q5T0J3 134 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 WDR74Q6RFH5 385 aaPredicted RBP3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 ARCQ7LC44 396 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 TMCO2Q7Z6W1 182 aaPredicted RBP3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 DHDDSQ86SQ9 333 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 PPP1R27Q86WC6 154 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 HTR3CQ8WXA8 447 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 UBE2E3Q969T4 207 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 TIMD4Q96H15 378 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 NPY6RQ99463 290 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 RAB34Q9BZG1 259 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 TM9SF3Q9HD45 589 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 TMEM9Q9P0T7 183 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 ASTN1O14525 1302 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 ZNF292O60281 2723 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 AGRNO00468 2067 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 CACNA1BQ00975 2339 aa3.58□□□□□ -1.84
PRPF38A-203ENST00000487160 A0A0G2JRQ6 117 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 CYSRT1A8MQ03 144 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 TIMM8AO60220 97 aaPredicted RBP3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 FCMRO60667 390 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 RAMP3O60896 148 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 RBMY1CP0DJD4 496 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 SFTPCP11686 197 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 CCR1P32246 355 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 PTGDSP41222 190 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 DUSP3P51452 185 aaPredicted RBP3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 ATP1B3P54709 279 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 GRB7Q14451 532 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 KYAT1Q16773 422 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 RNF212Q495C1 297 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 GPRC6AQ5T6X5 926 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 UNQ9370/PRO34162Q6UXP9 181 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 ASCL5Q7RTU5 278 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 LOXHD1Q8IVV2 1947 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 CDH26Q8IXH8 852 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 OR13C2Q8NGS9 318 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 PHOSPHO2Q8TCD6 241 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 ST8SIA1Q92185 356 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 MTMR9Q96QG7 549 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 COPS8Q99627 209 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 NICN1Q9BSH3 213 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 TCHPQ9BT92 498 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 MCCC2Q9HCC0 563 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 BAHCC1Q9P281 2608 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 COPS3Q9UNS2 423 aa3.57□□□□□ -1.84
PRPF38A-203ENST00000487160 CFAP47Q6ZTR5 3102 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms