RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 DAZ2Q13117 558 aaKnown RBP3.12□□□□□ -1.91
SMC4-218ENST00000486711 RCN1Q15293 331 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 C2orf83Q53S99 150 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 PEX26Q7Z412 305 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 BBS5Q8N3I7 341 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 ZNF557Q8N988 423 aaPredicted RBP3.12□□□□□ -1.91
SMC4-218ENST00000486711 VN1R2Q8NFZ6 395 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 OR10G9Q8NGN4 311 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 RAB3IL1Q8TBN0 382 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 GPR151Q8TDV0 419 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 SDR42E1Q8WUS8 393 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 PIBF1Q8WXW3 757 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 GPR61Q9BZJ8 451 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 CLMPQ9H6B4 373 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 DAZ3Q9NR90 486 aaKnown RBP3.12□□□□□ -1.91
SMC4-218ENST00000486711 CCL28Q9NRJ3 127 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 CLCF1Q9UBD9 225 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 CSDC2Q9Y534 153 aaKnown RBP3.12□□□□□ -1.91
SMC4-218ENST00000486711 CHD4Q14839 1912 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 H3BNH8 94 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 SGK1O00141 431 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 SLC31A2O15432 143 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 RNF13O43567 381 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 PNMA6AP0CW24 399 aaPredicted RBP3.11□□□□□ -1.91
SMC4-218ENST00000486711 ZNF24P17028 368 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 NUDT1P36639 197 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 CTRLP40313 264 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 TNNT2P45379 298 aaPredicted RBP3.11□□□□□ -1.91
SMC4-218ENST00000486711 PRMT2P55345 433 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 BEX3Q00994 111 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 SRSF5Q13243 272 aaKnown RBP3.11□□□□□ -1.91
SMC4-218ENST00000486711 IDI1Q13907 227 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 GPNMBQ14956 572 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 RFX4Q33E94 735 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 HSP90AB3PQ58FF7 597 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 XKR7Q5GH72 579 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 RAET1LQ5VY80 246 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 CARD17Q5XLA6 110 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 CTRB2Q6GPI1 263 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 SLC34A3Q8N130 599 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 B3GNT7Q8NFL0 401 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 OR6X1Q8NH79 312 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 PLPPR1Q8TBJ4 325 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 MCOLN3Q8TDD5 553 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 RDH5Q92781 318 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 MYDGFQ969H8 173 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 MED8Q96G25 268 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 RARRES2Q99969 163 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 DEFB127Q9H1M4 99 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 VPS37BQ9H9H4 285 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 EML4Q9HC35 981 aaKnown RBP3.11□□□□□ -1.91
SMC4-218ENST00000486711 ANAPC11Q9NYG5 84 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 GNPTGQ9UJJ9 305 aa3.11□□□□□ -1.91
SMC4-218ENST00000486711 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.11□□□□□ -1.91
SMC4-218ENST00000486711 A0A0G2JLM5 398 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 A0A1B0GUA9 196 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 C9JVG2 144 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 LSM1O15116 133 aaKnown RBP3.1□□□□□ -1.91
SMC4-218ENST00000486711 CSF3P09919 207 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 GKN3PP0CG01 181 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 TOP1P11387 765 aaKnown RBP3.1□□□□□ -1.91
SMC4-218ENST00000486711 CRISP2P16562 243 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 BTCP35070 178 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 NPBWR2P48146 333 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 TFPI2P48307 235 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 ACLYP53396 1101 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 UNC119Q13432 240 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 CUL2Q13617 745 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 ZBED5Q49AG3 693 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 COA6Q5JTJ3 125 aaKnown RBP3.1□□□□□ -1.91
SMC4-218ENST00000486711 LCN12Q6JVE5 192 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 METAP1DQ6UB28 335 aaPredicted RBP3.1□□□□□ -1.91
SMC4-218ENST00000486711 TMEM135Q86UB9 458 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 LHFPL3Q86UP9 236 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 KRTAP11-1Q8IUC1 163 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 TTC5Q8N0Z6 440 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 PUSL1Q8N0Z8 303 aaKnown RBP3.1□□□□□ -1.91
SMC4-218ENST00000486711 ZADH2Q8N4Q0 377 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 OR4F15Q8NGB8 312 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 OR2G3Q8NGZ4 309 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 RHEBL1Q8TAI7 183 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 ACER1Q8TDN7 264 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 OR2M2Q96R28 347 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 NXF3Q9H4D5 531 aaKnown RBP3.1□□□□□ -1.91
SMC4-218ENST00000486711 SAMSN1Q9NSI8 373 aaKnown RBP3.1□□□□□ -1.91
SMC4-218ENST00000486711 XCL2Q9UBD3 114 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 PACSIN2Q9UNF0 486 aaPredicted RBP3.1□□□□□ -1.91
SMC4-218ENST00000486711 MSH6P52701 1360 aa3.1□□□□□ -1.91
SMC4-218ENST00000486711 A0A0B4J2A0 478 aa3.09□□□□□ -1.91
SMC4-218ENST00000486711 KIR2DL5BA0A0G2JN68 375 aa3.09□□□□□ -1.91
SMC4-218ENST00000486711 KIR2DL5BA0A0G2JPC4 375 aa3.09□□□□□ -1.91
SMC4-218ENST00000486711 KRTAP4-16G5E9R7 235 aaPredicted RBP3.09□□□□□ -1.91
SMC4-218ENST00000486711 ZNF861PO60384 105 aa3.09□□□□□ -1.91
SMC4-218ENST00000486711 EIF3GO75821 320 aaKnown RBP eCLIP3.09□□□□□ -1.91
SMC4-218ENST00000486711 KRT14P02533 472 aa3.09□□□□□ -1.91
SMC4-218ENST00000486711 KRT6AP02538 564 aa3.09□□□□□ -1.91
SMC4-218ENST00000486711 NR2C1P13056 603 aa3.09□□□□□ -1.91
SMC4-218ENST00000486711 TDGF1P13385 188 aa3.09□□□□□ -1.91
SMC4-218ENST00000486711 ZNF17P17021 662 aa3.09□□□□□ -1.91
SMC4-218ENST00000486711 CCNCP24863 283 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms