RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 MED20Q9H944 212 aa5.72□□□□□ -1.49
HERC4-210ENST00000480158 NRIP3Q9NQ35 241 aa5.72□□□□□ -1.49
HERC4-210ENST00000480158 IMPAD1Q9NX62 359 aa5.72□□□□□ -1.49
HERC4-210ENST00000480158 PCDHGB5Q9Y5G0 923 aa5.72□□□□□ -1.49
HERC4-210ENST00000480158 FAM215AQ9Y5M1 114 aa5.72□□□□□ -1.49
HERC4-210ENST00000480158 SLC35F4A4IF30 521 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 HTR3EA5X5Y0 456 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 FIGNL2A6NMB9 653 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 ZNF716A6NP11 495 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 ZAR1LA6NP61 321 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 AHRRA9YTQ3 701 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 PRKYO43930 277 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 CYTIPO60759 359 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 CAPGP40121 348 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 CDKN2AP42771 156 aaKnown RBP5.71□□□□□ -1.5
HERC4-210ENST00000480158 SELENOPP49908 381 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 RPS6KA3P51812 740 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 SLC16A1P53985 500 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 ADARB1P78563 741 aaKnown RBP5.71□□□□□ -1.5
HERC4-210ENST00000480158 CDK5Q00535 292 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 RBPJQ06330 500 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 PMPCAQ10713 525 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 FOXF2Q12947 444 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 PGGHGQ32M88 737 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 RPL13AP3Q6NVV1 102 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 NIPAL3Q6P499 406 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 LEG1Q6P5S2 330 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 B3GLCTQ6Y288 498 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 PTCHD4Q6ZW05 846 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 ZIC4Q8N9L1 334 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 OR9Q1Q8NGQ5 310 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 RNF128Q8TEB7 428 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 RASSF4Q9H2L5 321 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 C8orf4Q9NR00 106 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 PAQR5Q9NXK6 330 aaPredicted RBP5.71□□□□□ -1.5
HERC4-210ENST00000480158 ENOPH1Q9UHY7 261 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 ING1Q9UK53 422 aaPredicted RBP5.71□□□□□ -1.5
HERC4-210ENST00000480158 RASD1Q9Y272 281 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 NOX1Q9Y5S8 564 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 KIAA1549Q9HCM3 1950 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 NBASA2RRP1 2371 aa5.71□□□□□ -1.5
HERC4-210ENST00000480158 CHD6Q8TD26 2715 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 ZNF726A6NNF4 738 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 XKRYO14609 159 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 TRAF3IP2O43734 574 aaPredicted RBP5.7□□□□□ -1.5
HERC4-210ENST00000480158 SMNDC1O75940 238 aaKnown RBP eCLIP5.7□□□□□ -1.5
HERC4-210ENST00000480158 TSPAN19P0C672 248 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 CLUP10909 449 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 GGT2P36268 569 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 UQCRFS1P47985 274 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 CENPAP49450 140 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 CDC42P60953 191 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 RPL27P61353 136 aaKnown RBP5.7□□□□□ -1.5
HERC4-210ENST00000480158 FMODQ06828 376 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 CD47Q08722 323 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 KRR1Q13601 381 aaKnown RBP5.7□□□□□ -1.5
HERC4-210ENST00000480158 CRMP1Q14194 572 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 MESTQ5EB52 335 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 TTC23Q5W5X9 447 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 PLBD1Q6P4A8 553 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 B3GNT6Q6ZMB0 384 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 SEM1Q6ZVN7 128 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 AAED1Q7RTV5 226 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 FAM122BQ7Z309 247 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.7□□□□□ -1.5
HERC4-210ENST00000480158 LNX2Q8N448 690 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 BBS1Q8NFJ9 593 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 CNIH3Q8TBE1 160 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 HTRA1Q92743 480 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 HRASLS5Q96KN8 279 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 RDH12Q96NR8 316 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 SLC38A2Q96QD8 506 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 HCAR1Q9BXC0 346 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 TEX12Q9BXU0 123 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 SYT4Q9H2B2 425 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 OR51V1Q9H2C8 321 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 TXNIPQ9H3M7 391 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 AMBNQ9NP70 447 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 RPRD1BQ9NQG5 326 aaKnown RBP5.7□□□□□ -1.5
HERC4-210ENST00000480158 KLHL9Q9P2J3 617 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 CLCF1Q9UBD9 225 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 NDRG4Q9ULP0 352 aaKnown RBP5.7□□□□□ -1.5
HERC4-210ENST00000480158 NOSIPQ9Y314 301 aaKnown RBP5.7□□□□□ -1.5
HERC4-210ENST00000480158 FLVCR1Q9Y5Y0 555 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 KMT2BQ9UMN6 2715 aaPredicted RBP5.7□□□□□ -1.5
HERC4-210ENST00000480158 COL12A1Q99715 3063 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 A0A1W2PNV4 684 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 OR6C68A6NDL8 312 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 EIF4E1BA6NMX2 242 aaKnown RBP5.7□□□□□ -1.5
HERC4-210ENST00000480158 RIIAD1A6NNX1 92 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 M0R3G1 203 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 EREGO14944 169 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 SURF4O15260 269 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 SLC16A6O15403 523 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 DNPH1O43598 174 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 WDR1O75083 606 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 MRPL33O75394 65 aaKnown RBP5.7□□□□□ -1.5
HERC4-210ENST00000480158 TOXO94900 526 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 VAMP5O95183 116 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 GPANK1O95872 356 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms